G771620



Basic Information


Item Value
gene id G771620
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 11980509 ~ 11980962 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU879107
caaggtcttgtacatcttgctagtagggctgctgctttccggtttcagtttattcaaaggctgctttatggaccggaaaatgtggtgtggagaggggtggcaggtcttatattacagcgggttggaggattaggtttaaagaaggctttatttctggttgatagtagccagatttctagggagggagtacctccgttttatagaggccttctcagagtgtggagcataatgaaggtgtccagaagaacttcagcggagtcagggcattggctgttggaggaacctctggtgtatggggcaagactggattgtacaactgcagctgttccacatttctccaagattctggtgaaggggaaaatcatcaccttaagacagttaatggccatggctgggcccgccttaatggatggaagaagggtggcagaacatttggggatgaggtcggaaagga

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU879107 True 454 lncRNA 0.48 1 11980509 11980962

Neighbor


gene id symbol gene type direction distance location
trnal-aag NA coding downstream 10259 11970169 ~ 11970250 (-)
LOC110532912 LOC106577883 coding downstream 191744 11759145 ~ 11788765 (-)
LOC110531453 LOC106577884 coding downstream 230282 11741911 ~ 11750227 (-)
LOC110531452 LOC106577886 coding downstream 278896 11698392 ~ 11701613 (-)
LOC110531450 med11 coding downstream 319676 11658664 ~ 11660833 (-)
LOC110531465 LOC107666294 coding upstream 145265 12092145 ~ 12144786 (-)
LOC110531459 LOC106577897 coding upstream 166532 12147494 ~ 12153015 (-)
trnas-uga-2 NA coding upstream 204670 12185486 ~ 12185735 (-)
trnaw-cca-4 NA coding upstream 217745 12198707 ~ 12198778 (-)
sox19b LOC106577904 coding upstream 455378 12436340 ~ 12441768 (-)
G771618 NA non-coding downstream 1293 11978889 ~ 11979216 (-)
G771615 NA non-coding downstream 8653 11971580 ~ 11971856 (-)
G771613 NA non-coding downstream 10498 11969603 ~ 11970011 (-)
G771608 NA non-coding downstream 17956 11954652 ~ 11962553 (-)
G771603 NA non-coding downstream 31217 11948011 ~ 11949292 (-)
G771635 NA non-coding upstream 27337 12008299 ~ 12009204 (-)
G771639 LOC106577893 non-coding upstream 40755 12021717 ~ 12032123 (-)
G771642 NA non-coding upstream 51912 12032874 ~ 12033112 (-)
G771644 NA non-coding upstream 53376 12034338 ~ 12034577 (-)
G771645 NA non-coding upstream 53894 12034856 ~ 12035098 (-)
G771614 NA other downstream 9155 11970904 ~ 11971354 (-)
G771540 LOC106577916 other downstream 91794 11870589 ~ 11916867 (-)
G771457 NA other downstream 350921 11628616 ~ 11629588 (-)
G772877 LOC106577934 other upstream 1013307 12994269 ~ 12996410 (-)
G773163 NA other upstream 1609291 13586326 ~ 13666937 (-)
G773168 NA other upstream 1716217 13697179 ~ 13699328 (-)
LOC110531538 NA other upstream 1999366 13977459 ~ 13987582 (-)
LOC118966145 LOC106599223 other upstream 2268439 14249401 ~ 14254157 (-)

Expression



Co-expression Network