G771649


Basic Information

Item Value
gene id G771649
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 12037033 ~ 12038915 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU879138
atacacaggctgccagttggggaaccctggtgtAGACTAAATATAAATAATGACGCTCACATTGAACATAATGAAACAAAATAAGAAGGGCTTCTATTAGCCTaacggaggtgtagattacatctcacattccagttttcctaatggaggtgtagattacatctcacattccagtgttcttaatggaggtgtagattacatctcacattccagtgttcctaatggaggtgtagattacatctcacattccagtgttcttaacagaggtgtagattacatctcacattccagtgttcctaatggaggtgtagattacatctcacattccagtgttcctaatggaggtgtagattacatctcacattccagtgttcctaatggaggtgtagattacatctcacattccagtgtttctaatggaggtgtagattacatctcacattccagtgtttctaatggaggtgtagattacatctcacattccagtgttcctaatggaggtgtagattacatctcacattccagtgttcctaatggaggtgtagattacatctcacattccagtgttcttaacagaggtgtagattacatctcacattccagtgttcctaatggaggtgtagattacatctcacattccagtgttccttatgGAGGTGTAGACTACATCTCACATTACAGTGTTCCAACTTGTATACCAGGCTGCTGTAGTC
>TU879141
atacacaggctgccagttggggaaccctggtgtAGACTAAATATAAATAATGACGCTCACATTGAACATAATGAAACAAAATAAGAAGGGCTTCTATTAGCCTaacggaggtgtagattacatctcacattccagttttcctaatggaggtgtagattacatctcacattccagtgttcttaatggaggtgtagattacatctcacattccagtgttcctaatggaggtgtagattacatctcacattccagtgttcttaatggaggtgtagattacatctcacattccagtgttcctaatggaggtgtagattacatctcacattccagtgttcttaatggaggtgtagattacatctcacattccagtgttcctaatggaggtgtagattacatctcacattccagtgttcttaacagaggtgtagattacatctcacattccagtgttcctaatggaggtgtagattacatctcacattccagtgttccttatgGAGGTGTAGACTACATCTCACATTACAGTGTTCCAACTTGTATACCAGGCTGCTGTAGTC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106607957

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU879138 False 713 lncRNA 0.40 2 12037033 12038915
TU879141 True 557 lncRNA 0.40 3 12037033 12038915

Neighbor

gene id symbol gene type direction distance location
trnal-aag NA coding downstream 66783 11970169 ~ 11970250 (-)
LOC110532912 LOC106577883 coding downstream 248268 11759145 ~ 11788765 (-)
LOC110531453 LOC106577884 coding downstream 286806 11741911 ~ 11750227 (-)
LOC110531452 LOC106577886 coding downstream 335420 11698392 ~ 11701613 (-)
LOC110531450 med11 coding downstream 376200 11658664 ~ 11660833 (-)
LOC110531465 LOC107666294 coding upstream 87312 12092145 ~ 12144786 (-)
LOC110531459 LOC106577897 coding upstream 108579 12147494 ~ 12153015 (-)
trnas-uga-2 NA coding upstream 146717 12185486 ~ 12185735 (-)
trnaw-cca-4 NA coding upstream 159792 12198707 ~ 12198778 (-)
sox19b LOC106577904 coding upstream 397425 12436340 ~ 12441768 (-)
G771647 NA non-coding downstream 1083 12035542 ~ 12035950 (-)
G771646 NA non-coding downstream 1566 12035195 ~ 12035467 (-)
G771645 NA non-coding downstream 1935 12034856 ~ 12035098 (-)
G771644 NA non-coding downstream 2456 12034338 ~ 12034577 (-)
G771642 NA non-coding downstream 3921 12032874 ~ 12033112 (-)
G771654 NA non-coding upstream 6672 12045587 ~ 12046144 (-)
G771656 LOC106577894 non-coding upstream 9697 12048612 ~ 12057878 (-)
G771664 NA non-coding upstream 31319 12070234 ~ 12070451 (-)
G771667 NA non-coding upstream 33241 12072156 ~ 12072444 (-)
G771668 NA non-coding upstream 33965 12072880 ~ 12073455 (-)
G771614 NA other downstream 65679 11970904 ~ 11971354 (-)
G771540 LOC106577916 other downstream 148318 11870589 ~ 11916867 (-)
G771457 NA other downstream 407445 11628616 ~ 11629588 (-)
G772877 LOC106577934 other upstream 955354 12994269 ~ 12996410 (-)
G773163 NA other upstream 1551338 13586326 ~ 13666937 (-)
G773168 NA other upstream 1658264 13697179 ~ 13699328 (-)
LOC110531538 NA other upstream 1941413 13977459 ~ 13987582 (-)
LOC118966145 LOC106599223 other upstream 2210486 14249401 ~ 14254157 (-)

Expression


Co-expression Network