G771732 (LOC105027204)


Basic Information

Item Value
gene id G771732
gene name LOC105027204
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 12195331 ~ 12197759 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU879237
AAGTTGAAGAAACATTTTTCAGCCTTTATTACAAAATGAAACAAATTAAAATCTGCATAGAATTAAATTAAAACACGAGAAACAACAATTTACAGAAGATGCAAATGTCATACCAATATAAACATgactataggctacatattacagTCCCTGATGTGTATATCATAAATACTCTAGGCCCCAGAGCAAAGATAAAGTAAATATAATCACTCTTCAAATAACCATTCATTCCTCTTGACGAAGGAGAGTAAAAGGGTGGGGGGTTGTTGCTGTCAGTTCTTTACGGTCCTCAAGTGGTCGTGGTTGAAAAGTGGTCACAGTCGATGGTCATCATTGATCATCACGCTTCCTActcctttcCGCCACAGGTACCACAGATGCATCCGAACAGTCCGTTGACCATCTGTATTACACACAGCACCAGCTCCACACTAGCAGCCACAAGTAGAGTGGCGAACAGGCCGATATTAAACTCCACAACATCCTTTGGCTCTTCACAAGTCGTCCAGAGTTCACTGTCACCCAGGTAGCTGCCGTTGTTTTTGAAGAAGGGCCTCCCCCAACTTGCATCTTTGTCACCTGGAGCCTTGAATAAGCAGACAGGCCCGTTGGCCAGGACCAGGGCAGCCGTAGCCAAACTGTACAGAGCTCCAACAACCCCAGCAGCAGCAAACCCAATGGACAGGAACATCCCACAGCGGTTGGCACAGCAACCCTTACTGCTGGTCAGGTGGATGTGGATGGCTGGGATAaggcactgagagagagagagagagagaggcacagagagagagacactcacagagagagacacagagagagacacacagagagagacagagagagagagacacacacagagagagacacagagagagagagagagagagagagagagagagagagagagagagagagagacacagagagagacacagagagagagagagagagagagagagagagagagagagagagagagagagagaaaacacacacacactcttcttcAACTGTTTTGTCATGGAGTAGCATATTGAGGCAGCATATTTCAGATGTACAGATCCATTCAGCATTCAAATGAATTCACACTTAGGAAACTGTTGATTATGAAAAGGGTActtttatttttcttaaaaaGTACTAAACAAACCTGTGATCATGGTATGACCAATGCTCTATAGAATCAGCATGTCTAAACCAagattggggtcaattccatttctatTCAGTCAGTATTGTTTTTCAATAAGAAACTTTGGAGTTAAAAAATGGAACTGACCTAAACACTGGTCTTCTAAACCAATCATGTTACATAATATTTAAAATTAAACCAATCATGTTACATAATATTTAAAATTAAACCAATCATGTTACATAATATTTAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU879237 True 1389 lncRNA 0.42 4 12195331 12197759

Neighbor

gene id symbol gene type direction distance location
trnas-uga-2 NA coding downstream 9618 12185486 ~ 12185735 (-)
LOC110531459 LOC106577897 coding downstream 42316 12147494 ~ 12153015 (-)
LOC110531465 LOC107666294 coding downstream 50545 12092145 ~ 12144786 (-)
trnal-aag NA coding downstream 225081 11970169 ~ 11970250 (-)
LOC110532912 LOC106577883 coding downstream 406566 11759145 ~ 11788765 (-)
trnaw-cca-4 NA coding upstream 948 12198707 ~ 12198778 (-)
sox19b LOC106577904 coding upstream 238581 12436340 ~ 12441768 (-)
LOC110531476 LOC106608954 coding upstream 271046 12468805 ~ 12479392 (-)
LOC118966197 NA coding upstream 273217 12470976 ~ 12471118 (-)
LOC118966200 NA coding upstream 275909 12473668 ~ 12473792 (-)
G771730 NA non-coding downstream 628 12194494 ~ 12194703 (-)
G771728 LOC100380853 non-coding downstream 3337 12191638 ~ 12191994 (-)
G771727 NA non-coding downstream 6554 12188241 ~ 12188777 (-)
G771726 NA non-coding downstream 7422 12187671 ~ 12187909 (-)
G771725 NA non-coding downstream 7905 12187080 ~ 12187426 (-)
G771735 LOC106577899 non-coding upstream 16264 12214023 ~ 12235651 (-)
G771751 NA non-coding upstream 38151 12235910 ~ 12236188 (-)
G771752 NA non-coding upstream 38627 12236386 ~ 12236628 (-)
G771753 NA non-coding upstream 39187 12236946 ~ 12237967 (-)
G771757 NA non-coding upstream 45843 12243602 ~ 12243819 (-)
G771614 NA other downstream 223977 11970904 ~ 11971354 (-)
G771540 LOC106577916 other downstream 306616 11870589 ~ 11916867 (-)
LOC110531452 LOC106577886 other downstream 493748 11698392 ~ 11701613 (-)
G771457 NA other downstream 565743 11628616 ~ 11629588 (-)
G772877 LOC106577934 other upstream 796510 12994269 ~ 12996410 (-)
G773163 NA other upstream 1392494 13586326 ~ 13666937 (-)
G773168 NA other upstream 1499420 13697179 ~ 13699328 (-)
LOC110531538 NA other upstream 1782569 13977459 ~ 13987582 (-)
LOC118966145 LOC106599223 other upstream 2051642 14249401 ~ 14254157 (-)

Expression


Co-expression Network