Gene
RNA
| Item | Value |
|---|---|
| gene id | G771782 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 12305000 ~ 12305239 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU879288 | True | 240 | lncRNA | 0.38 | 1 | 12305000 | 12305239 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnaw-cca-4 | NA | coding | downstream | 106222 | 12198707 ~ 12198778 (-) |
| trnas-uga-2 | NA | coding | downstream | 119287 | 12185486 ~ 12185735 (-) |
| LOC110531459 | LOC106577897 | coding | downstream | 151985 | 12147494 ~ 12153015 (-) |
| LOC110531465 | LOC107666294 | coding | downstream | 160214 | 12092145 ~ 12144786 (-) |
| trnal-aag | NA | coding | downstream | 334750 | 11970169 ~ 11970250 (-) |
| sox19b | LOC106577904 | coding | upstream | 131101 | 12436340 ~ 12441768 (-) |
| LOC110531476 | LOC106608954 | coding | upstream | 163566 | 12468805 ~ 12479392 (-) |
| LOC118966197 | NA | coding | upstream | 165737 | 12470976 ~ 12471118 (-) |
| LOC118966200 | NA | coding | upstream | 168429 | 12473668 ~ 12473792 (-) |
| LOC118966199 | NA | coding | upstream | 170268 | 12475507 ~ 12475649 (-) |
| G771781 | NA | non-coding | downstream | 7 | 12304274 ~ 12304993 (-) |
| G771780 | NA | non-coding | downstream | 733 | 12303924 ~ 12304267 (-) |
| G771778 | NA | non-coding | downstream | 2303 | 12302352 ~ 12302697 (-) |
| G771662 | gal3st4 | non-coding | downstream | 6271 | 12255486 ~ 12298729 (-) |
| G771768 | NA | non-coding | downstream | 35809 | 12268623 ~ 12269191 (-) |
| G771784 | NA | non-coding | upstream | 3541 | 12308780 ~ 12309340 (-) |
| G771785 | NA | non-coding | upstream | 4249 | 12309488 ~ 12309780 (-) |
| G771786 | NA | non-coding | upstream | 5187 | 12310426 ~ 12310657 (-) |
| G771788 | NA | non-coding | upstream | 8960 | 12314199 ~ 12314488 (-) |
| G771797 | LOC106577901 | non-coding | upstream | 21797 | 12327036 ~ 12338987 (-) |
| G771614 | NA | other | downstream | 333646 | 11970904 ~ 11971354 (-) |
| G771540 | LOC106577916 | other | downstream | 416285 | 11870589 ~ 11916867 (-) |
| LOC110532912 | LOC106577883 | other | downstream | 516431 | 11759145 ~ 11788765 (-) |
| LOC110531452 | LOC106577886 | other | downstream | 603417 | 11698392 ~ 11701613 (-) |
| G771457 | NA | other | downstream | 675412 | 11628616 ~ 11629588 (-) |
| G772877 | LOC106577934 | other | upstream | 689030 | 12994269 ~ 12996410 (-) |
| G773163 | NA | other | upstream | 1285014 | 13586326 ~ 13666937 (-) |
| G773168 | NA | other | upstream | 1391940 | 13697179 ~ 13699328 (-) |
| LOC110531538 | NA | other | upstream | 1675089 | 13977459 ~ 13987582 (-) |
| LOC118966145 | LOC106599223 | other | upstream | 1944162 | 14249401 ~ 14254157 (-) |
