Gene
RNA
| Item | Value |
|---|---|
| gene id | G771830 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 12402395 ~ 12403136 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU879341 | True | 720 | lncRNA | 0.37 | 2 | 12402395 | 12403136 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnaw-cca-4 | NA | coding | downstream | 203617 | 12198707 ~ 12198778 (-) |
| trnas-uga-2 | NA | coding | downstream | 216682 | 12185486 ~ 12185735 (-) |
| LOC110531459 | LOC106577897 | coding | downstream | 249380 | 12147494 ~ 12153015 (-) |
| LOC110531465 | LOC107666294 | coding | downstream | 257609 | 12092145 ~ 12144786 (-) |
| trnal-aag | NA | coding | downstream | 432145 | 11970169 ~ 11970250 (-) |
| sox19b | LOC106577904 | coding | upstream | 33204 | 12436340 ~ 12441768 (-) |
| LOC110531476 | LOC106608954 | coding | upstream | 65669 | 12468805 ~ 12479392 (-) |
| LOC118966197 | NA | coding | upstream | 67840 | 12470976 ~ 12471118 (-) |
| LOC118966200 | NA | coding | upstream | 70532 | 12473668 ~ 12473792 (-) |
| LOC118966199 | NA | coding | upstream | 72371 | 12475507 ~ 12475649 (-) |
| G771829 | NA | non-coding | downstream | 150 | 12401798 ~ 12402245 (-) |
| G771798 | LOC106577901 | non-coding | downstream | 40495 | 12327393 ~ 12361900 (-) |
| G771799 | NA | non-coding | downstream | 57788 | 12338447 ~ 12344607 (-) |
| G771797 | LOC106577901 | non-coding | downstream | 63408 | 12327036 ~ 12338987 (-) |
| G771788 | NA | non-coding | downstream | 87907 | 12314199 ~ 12314488 (-) |
| G771836 | NA | non-coding | upstream | 9376 | 12412512 ~ 12413795 (-) |
| G771840 | NA | non-coding | upstream | 12594 | 12415730 ~ 12416844 (-) |
| G772599 | NA | non-coding | upstream | 59256 | 12462392 ~ 12462606 (-) |
| G772608 | NA | non-coding | upstream | 78323 | 12481459 ~ 12481903 (-) |
| G772619 | NA | non-coding | upstream | 106085 | 12509221 ~ 12509435 (-) |
| G771614 | NA | other | downstream | 431041 | 11970904 ~ 11971354 (-) |
| G771540 | LOC106577916 | other | downstream | 513680 | 11870589 ~ 11916867 (-) |
| LOC110532912 | LOC106577883 | other | downstream | 613826 | 11759145 ~ 11788765 (-) |
| LOC110531452 | LOC106577886 | other | downstream | 700812 | 11698392 ~ 11701613 (-) |
| G771457 | NA | other | downstream | 772807 | 11628616 ~ 11629588 (-) |
| G772877 | LOC106577934 | other | upstream | 591133 | 12994269 ~ 12996410 (-) |
| G773163 | NA | other | upstream | 1187117 | 13586326 ~ 13666937 (-) |
| G773168 | NA | other | upstream | 1294043 | 13697179 ~ 13699328 (-) |
| LOC110531538 | NA | other | upstream | 1577192 | 13977459 ~ 13987582 (-) |
| LOC118966145 | LOC106599223 | other | upstream | 1846265 | 14249401 ~ 14254157 (-) |
