G771840



Basic Information


Item Value
gene id G771840
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 12415730 ~ 12416844 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU879351
TTTACAATTTAACaatttaaaatataaataaaccctagtagcctgggtaccagtctgttaaCCTAGCATTcctctagcctgggtaccagtctgttaaCCTAGCATTcctctagcctgggtaccagtctgttgaCCTAGCATTcctctagcctgggtaccagtctgttgaCCTAGCATTcctctagcctgggtaccagtctgttgaCCTAGCATTcctctagcctgggtaccagtctgttaaGCTAATATTACACTCCTGTGCCAGAGAGCAAAcaactggtacccaggctagaggAATGCTAGctacagactggtacccaggctagaggAATGTTGGctgaacagactggtacccaggctagaggAATGTTGGctgaacagactggtacccaggctagaggAATGTTGGctgaacagactggtacccaggctagaggaatgttagctaaagactggtacccaggctagaggaatgttagctaaagactggtacccaggctagagaAATGTTAGCTCAAGACTGGTATCCAGGCTAGAGGAATGTTAGCtcaagactggtacccaggctagaggAATGTTAGCggaacagactggtacccaggctagaggAATGTTAGCggaacagactggtacccaggctatttagagaacacagagaacacatgAAAATGTTAAATATAAGTATTATCCAACGTGGTCCTTGAACAGTGTTATAACAATGTTATTGTGTTTTAACGATGTTATTATGTTACAACACATAAATTAGCTAAATATGTTATAAAGCCTAATGTACCCCACCTCCTCAGGCCCTATTGCTTACTTAACACTCCACGTACCCTGCCGATGATGATAGCTGGCATGTTGGAGGCCTGCATGGCCATGACCACAGACATGGGGGTGAAGGGGGAGAGCAGCAGAGCCACCAGGCCAAAATACACCCCCAGGAACAGGACACctttGACTGTGTTGC

Function


NR:

description
mannose-P-dolichol utilization defect 1 protein-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU879351 True 970 lncRNA 0.47 2 12415730 12416844

Neighbor


gene id symbol gene type direction distance location
trnaw-cca-4 NA coding downstream 216952 12198707 ~ 12198778 (-)
trnas-uga-2 NA coding downstream 230017 12185486 ~ 12185735 (-)
LOC110531459 LOC106577897 coding downstream 262715 12147494 ~ 12153015 (-)
LOC110531465 LOC107666294 coding downstream 270944 12092145 ~ 12144786 (-)
trnal-aag NA coding downstream 445480 11970169 ~ 11970250 (-)
sox19b LOC106577904 coding upstream 19496 12436340 ~ 12441768 (-)
LOC110531476 LOC106608954 coding upstream 51961 12468805 ~ 12479392 (-)
LOC118966197 NA coding upstream 54132 12470976 ~ 12471118 (-)
LOC118966200 NA coding upstream 56824 12473668 ~ 12473792 (-)
LOC118966199 NA coding upstream 58663 12475507 ~ 12475649 (-)
G771836 NA non-coding downstream 1935 12412512 ~ 12413795 (-)
G771830 NA non-coding downstream 12594 12402395 ~ 12403136 (-)
G771829 NA non-coding downstream 13485 12401798 ~ 12402245 (-)
G771798 LOC106577901 non-coding downstream 53830 12327393 ~ 12361900 (-)
G771799 NA non-coding downstream 71123 12338447 ~ 12344607 (-)
G772599 NA non-coding upstream 45548 12462392 ~ 12462606 (-)
G772608 NA non-coding upstream 64615 12481459 ~ 12481903 (-)
G772619 NA non-coding upstream 92377 12509221 ~ 12509435 (-)
G772620 NA non-coding upstream 92882 12509726 ~ 12509981 (-)
G772621 NA non-coding upstream 93205 12510049 ~ 12510423 (-)
G771614 NA other downstream 444376 11970904 ~ 11971354 (-)
G771540 LOC106577916 other downstream 527015 11870589 ~ 11916867 (-)
LOC110532912 LOC106577883 other downstream 627161 11759145 ~ 11788765 (-)
LOC110531452 LOC106577886 other downstream 714147 11698392 ~ 11701613 (-)
G771457 NA other downstream 786142 11628616 ~ 11629588 (-)
G772877 LOC106577934 other upstream 577425 12994269 ~ 12996410 (-)
G773163 NA other upstream 1173409 13586326 ~ 13666937 (-)
G773168 NA other upstream 1280335 13697179 ~ 13699328 (-)
LOC110531538 NA other upstream 1563484 13977459 ~ 13987582 (-)
LOC118966145 LOC106599223 other upstream 1832557 14249401 ~ 14254157 (-)

Expression



Co-expression Network