G772658



Basic Information


Item Value
gene id G772658
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 12584412 ~ 12584664 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU880332
TGTCATTGCAACTCAGACACATCTTCttattaaaataaatgtttcagTTCTGAAATGATTTCATTGTCTTTGGGTGATAAATGCATTCCAGTGTAATATTTGGTTCTGTTTCCCGGGAAATAACGTGAAATTCGGACACTTAAATAGAATGCCATTATCAAGGAACCCTAACATCATAATTGATATCTATCATGTATTCGATTTTGACAGAAGCTTATTTCCCGGGAAAACAGAACCTAAGGTTCGACTTTTT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU880332 True 253 lncRNA 0.34 1 12584412 12584664

Neighbor


gene id symbol gene type direction distance location
LOC110531482 LOC106577910 coding downstream 911 12566380 ~ 12583501 (-)
LOC110531481 LOC106577909 coding downstream 21798 12552125 ~ 12562614 (-)
senp3b LOC106577906 coding downstream 76671 12484761 ~ 12507741 (-)
LOC118966199 NA coding downstream 108763 12475507 ~ 12475649 (-)
LOC118966200 NA coding downstream 110620 12473668 ~ 12473792 (-)
LOC110531484 LOC106577912 coding upstream 11221 12595885 ~ 12635228 (-)
trnaa-ugc-29 NA coding upstream 69055 12653719 ~ 12653789 (-)
LOC110531492 LOC106577986 coding upstream 271902 12856566 ~ 12876446 (-)
ripk3 ripk4 coding upstream 381469 12966133 ~ 12983100 (-)
LOC110532921 LOC106577946 coding upstream 428048 13012712 ~ 13014459 (-)
G772653 NA non-coding downstream 36148 12547908 ~ 12548264 (-)
G772646 NA non-coding downstream 41004 12543191 ~ 12543408 (-)
G772645 NA non-coding downstream 41634 12542455 ~ 12542778 (-)
G772643 NA non-coding downstream 43841 12540280 ~ 12540571 (-)
G772661 NA non-coding upstream 80 12584744 ~ 12585399 (-)
G772665 NA non-coding upstream 4743 12589407 ~ 12589765 (-)
G772686 NA non-coding upstream 59303 12643967 ~ 12644277 (-)
G772707 NA non-coding upstream 89892 12674556 ~ 12675819 (-)
G772709 NA non-coding upstream 92513 12677177 ~ 12677484 (-)
G771614 NA other downstream 613058 11970904 ~ 11971354 (-)
G771540 LOC106577916 other downstream 695697 11870589 ~ 11916867 (-)
LOC110532912 LOC106577883 other downstream 795843 11759145 ~ 11788765 (-)
LOC110531452 LOC106577886 other downstream 882829 11698392 ~ 11701613 (-)
G771457 NA other downstream 954824 11628616 ~ 11629588 (-)
G772877 LOC106577934 other upstream 409605 12994269 ~ 12996410 (-)
G773163 NA other upstream 1005589 13586326 ~ 13666937 (-)
G773168 NA other upstream 1112515 13697179 ~ 13699328 (-)
LOC110531538 NA other upstream 1395664 13977459 ~ 13987582 (-)
LOC118966145 LOC106599223 other upstream 1664737 14249401 ~ 14254157 (-)

Expression



Co-expression Network