G772707


Basic Information

Item Value
gene id G772707
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 12674556 ~ 12675819 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU880387
AAAATGGACGACTTCGAAAGATCTTTAATTGTTCTGTTTTGGACACATTAGTCGTTAGGTACAGTATAGTTGTTTGCATCCATGGACAGGTTCCTGTCCGCTGTGCGGTCTGAACTACGTCAACATTTGCATTGGTAAATGTTCTGCAATCTGCACTGAACACCCGGTCTGACAGAAACCTGTAGTTAAAGTATCACGGCTTTAGAGACCGTCTGCATAGAACCTTAACCGCTAGCCAAAAACCTTTAAATGAGATCTTCCACCCAGATATACTTGCATGCATTCTTCATCAGTTACCATGAATAGTGACTAATGTGAAAGGTATTGACAGAGGTACATAATGATGGATAGACCTTCATAGTGTAATGTCTAACTGAAAATGAGAGAGACAACACAGTGAACCAATTCAAATACTCTGAGTAACAAGTTCACTTACTGCTCTCACTCTTAAATCTATAAAGGTCCAAGTAGCGGACTGACACTAAAAAACAACATTAAATTAGCTTCCTATCTTAATGACATGCAAATAGATATTAACTCCAAATGAACATAAGTTAACAGTGAGAAAAGTTAAGTGTGTGAACTGGCTATGGGACTTCATTCCACCCTCTTCTTATtgacgatatagggaatagggagtaaTTTCAGACACACCCTAGGTTTGAAATAACCTGTCATGAATGAATAACAATAGTCAATTGAACAAAATCCCCAAACAGGGTAACCACACATTAAGGTGCTGCTGGTATACGCAGGTAGGCGAATAATAAATCACCACAGCAGAACAAAAGGAGATGGGAAAAAAATCATTTAGGACTTGAAGAAGTGCAATAGAAAAGAAGTTGTACAGTATTATTAGGTACTCAATGAGAACACGTGTGTCTCTTTGGCATAGAAAAAAATGATAGAAATAGATATCCTAGAAGGGGCATAAAGCCTCTGATGGCAATTAAAATTCTACTTCTAGGGGGTGTAGTGTGACAAAGCGTATCCTGAGAGATTCTGTGGAACAACAggaaatggactggatctttaggTGAGAGACTGGACGCAGGCCAATGGGGTGTCGTCTTAGGCTATGAGGAGGCGGTGCACTTGCTGCAGGTGTTGCTGTGATAGGACAAGACGGTGCACCTGCTCCTGGCCCTTGGCACACGGGATGGCCACGCGGCCTACAAACACCGTGCCTCCCTGCTTCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU880387 True 1201 lncRNA 0.42 2 12674556 12675819

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-29 NA coding downstream 20767 12653719 ~ 12653789 (-)
LOC110531484 LOC106577912 coding downstream 39328 12595885 ~ 12635228 (-)
LOC110531482 LOC106577910 coding downstream 91055 12566380 ~ 12583501 (-)
LOC110531481 LOC106577909 coding downstream 111942 12552125 ~ 12562614 (-)
senp3b LOC106577906 coding downstream 166815 12484761 ~ 12507741 (-)
LOC110531492 LOC106577986 coding upstream 180747 12856566 ~ 12876446 (-)
ripk3 ripk4 coding upstream 290314 12966133 ~ 12983100 (-)
LOC110532921 LOC106577946 coding upstream 336893 13012712 ~ 13014459 (-)
LOC118966159 LOC106577936 coding upstream 444178 13119997 ~ 13139049 (-)
LOC110531504 tri39 coding upstream 535696 13211515 ~ 13217001 (-)
G772686 NA non-coding downstream 30279 12643967 ~ 12644277 (-)
G772665 NA non-coding downstream 84791 12589407 ~ 12589765 (-)
G772661 NA non-coding downstream 89157 12584744 ~ 12585399 (-)
G772658 NA non-coding downstream 89892 12584412 ~ 12584664 (-)
G772709 NA non-coding upstream 1358 12677177 ~ 12677484 (-)
G772710 NA non-coding upstream 6077 12681896 ~ 12682183 (-)
G772753 NA non-coding upstream 82671 12758490 ~ 12764721 (-)
G772797 NA non-coding upstream 161447 12837266 ~ 12838655 (-)
G772798 NA non-coding upstream 164391 12840210 ~ 12840885 (-)
G771614 NA other downstream 703202 11970904 ~ 11971354 (-)
G771540 LOC106577916 other downstream 785841 11870589 ~ 11916867 (-)
LOC110532912 LOC106577883 other downstream 885987 11759145 ~ 11788765 (-)
LOC110531452 LOC106577886 other downstream 972973 11698392 ~ 11701613 (-)
G771457 NA other downstream 1044968 11628616 ~ 11629588 (-)
G772877 LOC106577934 other upstream 318450 12994269 ~ 12996410 (-)
G773163 NA other upstream 914434 13586326 ~ 13666937 (-)
G773168 NA other upstream 1021360 13697179 ~ 13699328 (-)
LOC110531538 NA other upstream 1304509 13977459 ~ 13987582 (-)
LOC118966145 LOC106599223 other upstream 1573582 14249401 ~ 14254157 (-)

Expression


Co-expression Network