Gene
RNA
| Item | Value |
|---|---|
| gene id | G772709 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 12677177 ~ 12677484 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: small proline-rich protein 3-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU880389 | True | 308 | lncRNA | 0.48 | 1 | 12677177 | 12677484 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnaa-ugc-29 | NA | coding | downstream | 23388 | 12653719 ~ 12653789 (-) |
| LOC110531484 | LOC106577912 | coding | downstream | 41949 | 12595885 ~ 12635228 (-) |
| LOC110531482 | LOC106577910 | coding | downstream | 93676 | 12566380 ~ 12583501 (-) |
| LOC110531481 | LOC106577909 | coding | downstream | 114563 | 12552125 ~ 12562614 (-) |
| senp3b | LOC106577906 | coding | downstream | 169436 | 12484761 ~ 12507741 (-) |
| LOC110531492 | LOC106577986 | coding | upstream | 179082 | 12856566 ~ 12876446 (-) |
| ripk3 | ripk4 | coding | upstream | 288649 | 12966133 ~ 12983100 (-) |
| LOC110532921 | LOC106577946 | coding | upstream | 335228 | 13012712 ~ 13014459 (-) |
| LOC118966159 | LOC106577936 | coding | upstream | 442513 | 13119997 ~ 13139049 (-) |
| LOC110531504 | tri39 | coding | upstream | 534031 | 13211515 ~ 13217001 (-) |
| G772707 | NA | non-coding | downstream | 1358 | 12674556 ~ 12675819 (-) |
| G772686 | NA | non-coding | downstream | 32900 | 12643967 ~ 12644277 (-) |
| G772665 | NA | non-coding | downstream | 87412 | 12589407 ~ 12589765 (-) |
| G772661 | NA | non-coding | downstream | 91778 | 12584744 ~ 12585399 (-) |
| G772658 | NA | non-coding | downstream | 92513 | 12584412 ~ 12584664 (-) |
| G772710 | NA | non-coding | upstream | 4412 | 12681896 ~ 12682183 (-) |
| G772753 | NA | non-coding | upstream | 81006 | 12758490 ~ 12764721 (-) |
| G772797 | NA | non-coding | upstream | 159782 | 12837266 ~ 12838655 (-) |
| G772798 | NA | non-coding | upstream | 162726 | 12840210 ~ 12840885 (-) |
| G772802 | NA | non-coding | upstream | 167612 | 12845096 ~ 12845394 (-) |
| G771614 | NA | other | downstream | 705823 | 11970904 ~ 11971354 (-) |
| G771540 | LOC106577916 | other | downstream | 788462 | 11870589 ~ 11916867 (-) |
| LOC110532912 | LOC106577883 | other | downstream | 888608 | 11759145 ~ 11788765 (-) |
| LOC110531452 | LOC106577886 | other | downstream | 975594 | 11698392 ~ 11701613 (-) |
| G771457 | NA | other | downstream | 1047589 | 11628616 ~ 11629588 (-) |
| G772877 | LOC106577934 | other | upstream | 316785 | 12994269 ~ 12996410 (-) |
| G773163 | NA | other | upstream | 912769 | 13586326 ~ 13666937 (-) |
| G773168 | NA | other | upstream | 1019695 | 13697179 ~ 13699328 (-) |
| LOC110531538 | NA | other | upstream | 1302844 | 13977459 ~ 13987582 (-) |
| LOC118966145 | LOC106599223 | other | upstream | 1571917 | 14249401 ~ 14254157 (-) |
