G772803



Basic Information


Item Value
gene id G772803
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 12845531 ~ 12845754 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU880489
GAAGTGTCAACATCAATTTCTCTACTCTGATCACTGTCCTGACAATCTGATGGGCAGGGACCTCCTGTGTAAACTTGGCATCAACATAACATGTGGCCAAACGGTTTTAACTTTTAttcatgaggaagaggaggaagtggtGGAGCAATTGATgttaatgtctgagtgttgtgaCTGGTATTATGCATGGGATGTTGATGACGAGGTGCCCAATATTGCTCGTG

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU880489 True 224 lncRNA 0.44 1 12845531 12845754

Neighbor


gene id symbol gene type direction distance location
trnaa-ugc-29 NA coding downstream 191742 12653719 ~ 12653789 (-)
LOC110531484 LOC106577912 coding downstream 210303 12595885 ~ 12635228 (-)
LOC110531482 LOC106577910 coding downstream 262030 12566380 ~ 12583501 (-)
LOC110531481 LOC106577909 coding downstream 282917 12552125 ~ 12562614 (-)
senp3b LOC106577906 coding downstream 337790 12484761 ~ 12507741 (-)
LOC110531492 LOC106577986 coding upstream 10812 12856566 ~ 12876446 (-)
ripk3 ripk4 coding upstream 120379 12966133 ~ 12983100 (-)
LOC110532921 LOC106577946 coding upstream 166958 13012712 ~ 13014459 (-)
LOC118966159 LOC106577936 coding upstream 274243 13119997 ~ 13139049 (-)
LOC110531504 tri39 coding upstream 365761 13211515 ~ 13217001 (-)
G772802 NA non-coding downstream 137 12845096 ~ 12845394 (-)
G772798 NA non-coding downstream 4646 12840210 ~ 12840885 (-)
G772797 NA non-coding downstream 6876 12837266 ~ 12838655 (-)
G772753 NA non-coding downstream 80810 12758490 ~ 12764721 (-)
G772710 NA non-coding downstream 163348 12681896 ~ 12682183 (-)
G772857 NA non-coding upstream 94040 12939794 ~ 12942007 (-)
G772863 NA non-coding upstream 117669 12963423 ~ 13012014 (-)
G772914 NA non-coding upstream 234018 13079772 ~ 13084925 (-)
G772924 NA non-coding upstream 256275 13102029 ~ 13102298 (-)
G772934 NA non-coding upstream 266148 13111902 ~ 13112213 (-)
G771614 NA other downstream 874177 11970904 ~ 11971354 (-)
G771540 LOC106577916 other downstream 956816 11870589 ~ 11916867 (-)
LOC110532912 LOC106577883 other downstream 1056962 11759145 ~ 11788765 (-)
LOC110531452 LOC106577886 other downstream 1143948 11698392 ~ 11701613 (-)
G771457 NA other downstream 1215943 11628616 ~ 11629588 (-)
G772877 LOC106577934 other upstream 148515 12994269 ~ 12996410 (-)
G773163 NA other upstream 744499 13586326 ~ 13666937 (-)
G773168 NA other upstream 851425 13697179 ~ 13699328 (-)
LOC110531538 NA other upstream 1134574 13977459 ~ 13987582 (-)
LOC118966145 LOC106599223 other upstream 1403647 14249401 ~ 14254157 (-)

Expression



Co-expression Network