Gene
RNA
| Item | Value |
|---|---|
| gene id | G772239 |
| gene name | LOC106577950 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 13386349 ~ 13386568 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU879813 | True | 220 | lncRNA | 0.53 | 1 | 13386349 | 13386568 |
13,384,400
13,384,800
13,385,200
13,385,600
13,386,000
13,386,400
13,386,800
13,387,200
13,387,600
13,388,000
13,388,400
NC_048573.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531503 | LOC106577949 | coding | upstream | 10482 | 13366370 ~ 13375867 (+) |
| LOC118966160 | LOC106577945 | coding | upstream | 62458 | 13321306 ~ 13323891 (+) |
| LOC110532923 | LOC106577978 | coding | upstream | 76334 | 13299386 ~ 13310015 (+) |
| LOC110532922 | LOC106577946 | coding | upstream | 99524 | 13217467 ~ 13286825 (+) |
| LOC110531513 | LOC106577942 | coding | upstream | 187248 | 13179911 ~ 13199101 (+) |
| LOC110531519 | LOC106577953 | coding | downstream | 172807 | 13559375 ~ 13592005 (+) |
| LOC110531521 | NA | coding | downstream | 211784 | 13598352 ~ 13602342 (+) |
| LOC110531520 | LOC106577955 | coding | downstream | 215823 | 13602391 ~ 13611243 (+) |
| LOC110531525 | LOC106577958 | coding | downstream | 264697 | 13651265 ~ 13667682 (+) |
| LOC118966141 | LOC106577961 | coding | downstream | 295728 | 13682296 ~ 13694583 (+) |
| G772189 | NA | non-coding | upstream | 133817 | 13252251 ~ 13252532 (+) |
| G772175 | NA | non-coding | upstream | 156849 | 13228857 ~ 13229500 (+) |
| G772172 | NA | non-coding | upstream | 166958 | 13219151 ~ 13219391 (+) |
| G772171 | NA | non-coding | upstream | 167844 | 13217860 ~ 13218505 (+) |
| G772245 | NA | non-coding | downstream | 11412 | 13397980 ~ 13398328 (+) |
| G772253 | NA | non-coding | downstream | 24315 | 13410883 ~ 13411161 (+) |
| G772273 | NA | non-coding | downstream | 56028 | 13442596 ~ 13442803 (+) |
| G772264 | NA | non-coding | downstream | 89926 | 13476494 ~ 13488497 (+) |
| G772293 | NA | non-coding | downstream | 103082 | 13489650 ~ 13490426 (+) |
| LOC110531509 | tmm85 | other | upstream | 291279 | 13087000 ~ 13095070 (+) |
| G772033 | LOC106577932 | other | upstream | 422778 | 12938462 ~ 12963571 (+) |
| LOC110531469 | LOC106577901 | other | upstream | 980342 | 12317006 ~ 12406007 (+) |
| G769713 | NA | other | upstream | 2602941 | 10783091 ~ 10783408 (+) |
| G769681 | NA | other | upstream | 2700327 | 10685137 ~ 10686022 (+) |
| G772241 | LOC106577945 | other | downstream | 5229 | 13391797 ~ 13392721 (+) |
| G772402 | LOC106577959 | other | downstream | 285242 | 13671810 ~ 13710443 (+) |
| G772540 | NA | other | downstream | 531434 | 13918002 ~ 14018373 (+) |
| G773437 | NA | other | downstream | 638305 | 14024873 ~ 14028528 (+) |
