G772241 (LOC106577945)


Basic Information

Item Value
gene id G772241
gene name LOC106577945
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 13391797 ~ 13392721 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU879815
AGAATTATATTTAGTGCTAACTATAATCTCCATGAGATGAGTCACAAATACTCCCAGCGTCACTGTTTCCCCCGTGTAGATTGGTGGTGATGGGTTCTGAGTTCTaaacttgaaaatatgaagtatCTGTATTCAtttcactgagggagagaggggaatgtagaacgtttacattctgtcagaatATGTTATTGTTAGACATGAGGGATCCTATGGGAAGAAGAATGGCCACAGTCTGGTACATGTCAACATGACAGTTGTGACTTGAGGAGAAGTGAGGAATTTGAGCAGAGGTAAGGttaggtcagatgaagtgaggaagaacagatatcacaaaaattctgtctagcaacagaggCGTATTGGATGTTCAGAGGAGGAAGGGTTAAATACCAGTGACTGTGTGAAGATGTCTTATCCTTTGGGTGattaaacttggtttgagctttactAATCGTCAGTGGGTTTGGAAGTCTCTTGTGTCACTCGTGTCAAAAACGTAAATGAAAATGAGAAATATATGACTATACAGTAACTGCCTTACCGTCTTTGATCGATTTGATGTCAGGTACTTCCAACATTTTACGAGGTACCTCCCCTGTCATCCTATCTGAATGGAAGAAATGTCCGTGATGGGATGGGTACTGTATGCCATAGGCCACAGGACCTCTAATGGTGAAGCCAAGGTAGAAGCAGACGTCTCCAGACTTCCAAACTTTGCTTTGTTGGTCGGCACAGACTTCAATCTCCTTGCCATCAACACACGCAAACACCCTGTGCTGTCTAACCACTCCATTGACTGGAAGAAGAAGGTCCTGGACACTGGGTTCTCTCCACACCTCACCACTGCTCCACTTTTGATCTATAGTGTCTGTCCTTGCCTCTGGCCGTGCCATTTGATTCTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU879815 True 905 TUCP 0.44 2 13391797 13392721
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110531503 LOC106577949 coding upstream 15930 13366370 ~ 13375867 (+)
LOC118966160 LOC106577945 coding upstream 67906 13321306 ~ 13323891 (+)
LOC110532923 LOC106577978 coding upstream 81782 13299386 ~ 13310015 (+)
LOC110532922 LOC106577946 coding upstream 104972 13217467 ~ 13286825 (+)
LOC110531513 LOC106577942 coding upstream 192696 13179911 ~ 13199101 (+)
LOC110531519 LOC106577953 coding downstream 166654 13559375 ~ 13592005 (+)
LOC110531521 NA coding downstream 205631 13598352 ~ 13602342 (+)
LOC110531520 LOC106577955 coding downstream 209670 13602391 ~ 13611243 (+)
LOC110531525 LOC106577958 coding downstream 258544 13651265 ~ 13667682 (+)
LOC118966141 LOC106577961 coding downstream 289575 13682296 ~ 13694583 (+)
G772239 LOC106577950 non-coding upstream 5229 13386349 ~ 13386568 (+)
G772189 NA non-coding upstream 139265 13252251 ~ 13252532 (+)
G772175 NA non-coding upstream 162297 13228857 ~ 13229500 (+)
G772172 NA non-coding upstream 172406 13219151 ~ 13219391 (+)
G772245 NA non-coding downstream 5259 13397980 ~ 13398328 (+)
G772253 NA non-coding downstream 18162 13410883 ~ 13411161 (+)
G772273 NA non-coding downstream 49875 13442596 ~ 13442803 (+)
G772264 NA non-coding downstream 83773 13476494 ~ 13488497 (+)
G772293 NA non-coding downstream 96929 13489650 ~ 13490426 (+)
LOC110531509 tmm85 other upstream 296727 13087000 ~ 13095070 (+)
G772033 LOC106577932 other upstream 428226 12938462 ~ 12963571 (+)
LOC110531469 LOC106577901 other upstream 985790 12317006 ~ 12406007 (+)
G769713 NA other upstream 2608389 10783091 ~ 10783408 (+)
G769681 NA other upstream 2705775 10685137 ~ 10686022 (+)
G772402 LOC106577959 other downstream 279089 13671810 ~ 13710443 (+)
G772540 NA other downstream 525281 13918002 ~ 14018373 (+)
G773437 NA other downstream 632152 14024873 ~ 14028528 (+)
G773535 LOC106577997 other downstream 820728 14213449 ~ 14216852 (+)

Expression

G772241(LOC106577945) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.
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G772241(LOC106577945) Expression in each Bioproject

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G772241(LOC106577945) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 15.
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Co-expression Network