Gene
RNA
| Item | Value |
|---|---|
| gene id | G772264 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 13476494 ~ 13488497 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU879838 | False | 9782 | lncRNA | 0.38 | 3 | 13476494 | 13488497 |
| TU879839 | False | 10153 | lncRNA | 0.38 | 2 | 13476494 | 13488497 |
| TU879840 | False | 9742 | lncRNA | 0.38 | 3 | 13476494 | 13488497 |
| TU879841 | True | 9507 | lncRNA | 0.38 | 5 | 13476494 | 13488497 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531503 | LOC106577949 | coding | upstream | 100627 | 13366370 ~ 13375867 (+) |
| LOC118966160 | LOC106577945 | coding | upstream | 152603 | 13321306 ~ 13323891 (+) |
| LOC110532923 | LOC106577978 | coding | upstream | 166479 | 13299386 ~ 13310015 (+) |
| LOC110532922 | LOC106577946 | coding | upstream | 189669 | 13217467 ~ 13286825 (+) |
| LOC110531513 | LOC106577942 | coding | upstream | 277393 | 13179911 ~ 13199101 (+) |
| LOC110531519 | LOC106577953 | coding | downstream | 70878 | 13559375 ~ 13592005 (+) |
| LOC110531521 | NA | coding | downstream | 109855 | 13598352 ~ 13602342 (+) |
| LOC110531520 | LOC106577955 | coding | downstream | 113894 | 13602391 ~ 13611243 (+) |
| LOC110531525 | LOC106577958 | coding | downstream | 162768 | 13651265 ~ 13667682 (+) |
| LOC118966141 | LOC106577961 | coding | downstream | 193799 | 13682296 ~ 13694583 (+) |
| G772273 | NA | non-coding | upstream | 33691 | 13442596 ~ 13442803 (+) |
| G772253 | NA | non-coding | upstream | 65333 | 13410883 ~ 13411161 (+) |
| G772245 | NA | non-coding | upstream | 78166 | 13397980 ~ 13398328 (+) |
| G772239 | LOC106577950 | non-coding | upstream | 89926 | 13386349 ~ 13386568 (+) |
| G772293 | NA | non-coding | downstream | 1153 | 13489650 ~ 13490426 (+) |
| G772295 | NA | non-coding | downstream | 4990 | 13493487 ~ 13493837 (+) |
| G772296 | NA | non-coding | downstream | 7767 | 13496264 ~ 13496473 (+) |
| G772305 | NA | non-coding | downstream | 18910 | 13507407 ~ 13507619 (+) |
| G772306 | NA | non-coding | downstream | 19181 | 13507678 ~ 13507942 (+) |
| G772241 | LOC106577945 | other | upstream | 83773 | 13391797 ~ 13392721 (+) |
| LOC110531509 | tmm85 | other | upstream | 381424 | 13087000 ~ 13095070 (+) |
| G772033 | LOC106577932 | other | upstream | 512923 | 12938462 ~ 12963571 (+) |
| LOC110531469 | LOC106577901 | other | upstream | 1070487 | 12317006 ~ 12406007 (+) |
| G769713 | NA | other | upstream | 2693086 | 10783091 ~ 10783408 (+) |
| G772402 | LOC106577959 | other | downstream | 183313 | 13671810 ~ 13710443 (+) |
| G772540 | NA | other | downstream | 429505 | 13918002 ~ 14018373 (+) |
| G773437 | NA | other | downstream | 536376 | 14024873 ~ 14028528 (+) |
| G773535 | LOC106577997 | other | downstream | 724952 | 14213449 ~ 14216852 (+) |
