G773152


Basic Information

Item Value
gene id G773152
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 13506512 ~ 13506838 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU880886
gtgaggagtgtgtgtgtgacctggtgaataagtgtagcattggttgtgtttggaaaaggaaagcaagtcacttcctgttagatttttgtgttttcggtagagaattgtgtgtagtgttttgaaaaaagtgttttatgcaattgacaactgagtcaaaggctgagaaatagcttatggttttgtatatttggtgtgtagttttgcactttgagtgagaggtttcaaaaatcgtgtgacattaaaagattttgtgtgtaagcagttggaaaaaactgtaataccGATGATAAATCCAGCTGCTGTTTTTTCCTCTGCTGCCCCCCCGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU880886 True 327 lncRNA 0.39 1 13506512 13506838

Neighbor

gene id symbol gene type direction distance location
sb:cb1081 LOC106577950 coding downstream 27148 13442454 ~ 13483203 (-)
LOC110531502 LOC106577948 coding downstream 139336 13350120 ~ 13367176 (-)
LOC110531504 tri39 coding downstream 289511 13211515 ~ 13217001 (-)
LOC118966159 LOC106577936 coding downstream 367463 13119997 ~ 13139049 (-)
LOC110532921 LOC106577946 coding downstream 492053 13012712 ~ 13014459 (-)
LOC110531522 LOC106577957 coding upstream 118343 13625181 ~ 13643119 (-)
LOC110531523 LOC106577960 coding upstream 161088 13667926 ~ 13713529 (-)
LOC110532994 NA coding upstream 230570 13737408 ~ 13739231 (-)
LOC110531529 LOC106577990 coding upstream 239789 13746627 ~ 13755370 (-)
LOC110532926 LOC106577966 coding upstream 259030 13765868 ~ 13778605 (-)
G773149 NA non-coding downstream 4855 13501321 ~ 13501657 (-)
G773148 NA non-coding downstream 6075 13500162 ~ 13500437 (-)
G773147 NA non-coding downstream 6670 13499639 ~ 13499842 (-)
G773144 NA non-coding downstream 14070 13492086 ~ 13492442 (-)
G773158 NA non-coding upstream 10055 13516893 ~ 13517160 (-)
G773160 NA non-coding upstream 10757 13517595 ~ 13517928 (-)
G773174 NA non-coding upstream 12327 13519165 ~ 13519384 (-)
G773176 NA non-coding upstream 15492 13522330 ~ 13522683 (-)
G773179 NA non-coding upstream 19386 13526224 ~ 13526423 (-)
G772877 LOC106577934 other downstream 510102 12994269 ~ 12996410 (-)
G771614 NA other downstream 1535158 11970904 ~ 11971354 (-)
G771540 LOC106577916 other downstream 1617797 11870589 ~ 11916867 (-)
LOC110532912 LOC106577883 other downstream 1717943 11759145 ~ 11788765 (-)
LOC110531452 LOC106577886 other downstream 1804929 11698392 ~ 11701613 (-)
G773163 NA other upstream 83415 13586326 ~ 13666937 (-)
G773168 NA other upstream 190341 13697179 ~ 13699328 (-)
LOC110531538 NA other upstream 473490 13977459 ~ 13987582 (-)
LOC118966145 LOC106599223 other upstream 742563 14249401 ~ 14254157 (-)
G774427 LOC106578022 other upstream 1217216 14724054 ~ 14724522 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G38721 NA non-coding CI01000005 null 4543337 ~ 4543809 (-)
eurasian perch (Perca fluviatilis) G33048 NA non-coding NC_053114.1 CM020911.1 40207391 ~ 40208775 (-)