Gene
RNA
| Item | Value |
|---|---|
| gene id | G772540 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 13918002 ~ 14018373 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU880135 | False | 4550 | TUCP | 0.43 | 5 | 13918002 | 13923180 |
| TU880138 | False | 4550 | TUCP | 0.43 | 5 | 13918002 | 13923180 |
| TU880141 | False | 4662 | TUCP | 0.43 | 4 | 13918002 | 13923180 |
| TU880144 | False | 1209 | lncRNA | 0.44 | 4 | 13918002 | 14018373 |
| TU880147 | False | 1197 | lncRNA | 0.44 | 4 | 13918002 | 14018373 |
| TU880151 | False | 4546 | TUCP | 0.43 | 5 | 13918002 | 13923180 |
| TU880152 | False | 1073 | lncRNA | 0.45 | 4 | 13918002 | 14018373 |
| TU880153 | False | 4502 | TUCP | 0.43 | 6 | 13918002 | 13923180 |
| TU880157 | False | 1097 | lncRNA | 0.45 | 5 | 13918002 | 14018373 |
| TU880163 | False | 4498 | TUCP | 0.43 | 5 | 13918002 | 13923180 |
| TU880165 | False | 4554 | TUCP | 0.43 | 5 | 13918002 | 13923180 |
| TU880168 | False | 4614 | TUCP | 0.43 | 4 | 13918002 | 13923180 |
| TU880171 | False | 4502 | TUCP | 0.43 | 5 | 13918002 | 13923180 |
| TU880172 | False | 4631 | TUCP | 0.43 | 4 | 13918002 | 13923180 |
| TU880174 | False | 4863 | TUCP | 0.42 | 3 | 13918002 | 13923180 |
| TU880177 | False | 4894 | TUCP | 0.42 | 5 | 13918002 | 13923180 |
| TU880178 | False | 4631 | TUCP | 0.43 | 5 | 13918002 | 13923180 |
| TU880179 | False | 4886 | TUCP | 0.42 | 4 | 13918002 | 13923180 |
| TU880180 | False | 4550 | TUCP | 0.43 | 5 | 13918002 | 13923180 |
| TU880182 | False | 4558 | TUCP | 0.43 | 6 | 13918002 | 13923180 |
| TU880184 | False | 4646 | TUCP | 0.43 | 5 | 13918002 | 13923180 |
| TU880189 | False | 4776 | TUCP | 0.42 | 5 | 13918002 | 13923180 |
| TU880190 | False | 4683 | TUCP | 0.43 | 4 | 13918002 | 13923180 |
| TU880193 | False | 4610 | TUCP | 0.43 | 5 | 13918002 | 13923180 |
| TU880194 | False | 4799 | TUCP | 0.43 | 4 | 13918002 | 13923180 |
| TU880195 | False | 4583 | TUCP | 0.43 | 5 | 13918002 | 13923180 |
| TU880196 | False | 4782 | TUCP | 0.42 | 4 | 13918002 | 13923180 |
| TU880198 | False | 4606 | TUCP | 0.43 | 5 | 13918002 | 13923180 |
| TU880200 | False | 4890 | TUCP | 0.42 | 5 | 13918002 | 13923180 |
| TU880203 | False | 4811 | TUCP | 0.42 | 4 | 13918002 | 13923180 |
| TU880205 | False | 4579 | TUCP | 0.43 | 5 | 13918002 | 13923180 |
| TU880206 | True | 4666 | TUCP | 0.43 | 4 | 13918002 | 13923180 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531534 | LOC106577991 | coding | upstream | 13267 | 13896757 ~ 13904735 (+) |
| LOC118966141 | LOC106577961 | coding | upstream | 223419 | 13682296 ~ 13694583 (+) |
| LOC110531525 | LOC106577958 | coding | upstream | 250320 | 13651265 ~ 13667682 (+) |
| LOC110531520 | LOC106577955 | coding | upstream | 306759 | 13602391 ~ 13611243 (+) |
| LOC110531521 | NA | coding | upstream | 315660 | 13598352 ~ 13602342 (+) |
| LOC110531541 | LOC106594400 | coding | downstream | 33870 | 14052243 ~ 14069229 (+) |
| LOC118966143 | NA | coding | downstream | 82456 | 14100829 ~ 14108880 (+) |
| LOC110531546 | NA | coding | downstream | 92518 | 14110891 ~ 14140299 (+) |
| si:ch211-63p21.1 | LOC106577995 | coding | downstream | 220125 | 14238498 ~ 14243012 (+) |
| LOC110531550 | LOC106577826 | coding | downstream | 244568 | 14262941 ~ 14277145 (+) |
| G772458 | LOC106609922 | non-coding | upstream | 91690 | 13767934 ~ 13826312 (+) |
| G772486 | NA | non-coding | upstream | 93569 | 13816977 ~ 13824433 (+) |
| G772401 | NA | non-coding | upstream | 209604 | 13669504 ~ 13708398 (+) |
| G772338 | LOC106577957 | non-coding | upstream | 291188 | 13625187 ~ 13626814 (+) |
| G772354 | NA | non-coding | upstream | 359985 | 13557704 ~ 13558017 (+) |
| G773437 | NA | non-coding | downstream | 6500 | 14024873 ~ 14028528 (+) |
| G773464 | NA | non-coding | downstream | 113205 | 14131578 ~ 14200231 (+) |
| G773465 | NA | non-coding | downstream | 150219 | 14168592 ~ 14191296 (+) |
| G773535 | LOC106577997 | non-coding | downstream | 195076 | 14213449 ~ 14216852 (+) |
| G772402 | LOC106577959 | other | upstream | 207559 | 13671810 ~ 13710443 (+) |
| G772241 | LOC106577945 | other | upstream | 525281 | 13391797 ~ 13392721 (+) |
| LOC110531509 | tmm85 | other | upstream | 822932 | 13087000 ~ 13095070 (+) |
| G772033 | LOC106577932 | other | upstream | 954431 | 12938462 ~ 12963571 (+) |
| G773583 | NA | other | downstream | 288257 | 14306630 ~ 14328474 (+) |
| G773562 | LOC106577828 | other | downstream | 293095 | 14311468 ~ 14315250 (+) |
| G773601 | NA | other | downstream | 364297 | 14382670 ~ 14384166 (+) |
| cbln11 | LOC106577971 | coding | downstream | 82621 | 14005801 ~ 14009421 (+) |
| LOC100301641 | LOC100301641 | coding | downstream | 86377 | 14009557 ~ 14017498 (+) |
| G772544 | LOC106577970 | non-coding | downstream | 23140 | 13946320 ~ 13951913 (+) |
| G772569 | NA | non-coding | downstream | 51409 | 13974589 ~ 13975419 (+) |
