G774181


Basic Information

Item Value
gene id G774181
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 14114285 ~ 14123191 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU882109
GTAGAACAATATTTATTTTAGATTTGTCAATagttgcaacaacaaaaaaaacatacactGAAATTCATTTAACAACAATGTCAAAGAGAAAAGACATGGAAGTCATCTCccccaaaataaaaaatacacagTTCAGCTGATTTTATGATCTTATCAAATAACTCCTTTTCAAGAGCCTCGTCCCTACGGACCTGGATGATGAGTTCAGCCACTTTCTTCAGCAGTCTGGTTACCTCTGCTGCTGTACTCAGACCTGTAGTTACCGTGGATGTGGAGGAGGACAGTTCCTCTAATGTTTGAACATTTGTTTGGATTTTTTCCAGGCATTCAACAATTGGTTGAATACTTTTATTGAATTCTTCTGCACCATTCTTAATTTTCTCTTGGCCATTGTTCTCTAACAACATTTTGACGATGTTAGAAGCAGTGATAGCAGCTCCACTAACTGCACCCATGACTGCCCCTGCAACGAGCAGGGGGGTGCCCCCAGTAAATATAGTTAGAACTATTCCCGCTACCCCAGCTACACCAAATCCAGCCCCAACATTCCTGCCTGTGGCAGCATTGTCCTGTATCCTCTTAATAATAGCAGCTTTCTGTTTAAAGTAATTTGCTCTTGCTTGTAAATTTGTTCTCTTTCCTTCAAAGAGTTTCTTGAATGACTTGATGTCATGCTTGAGGTTTCCTAGTTCATTTGACACTGGAAGAAATATATATAATTGTCAGACAATGTTATCCAGAGGAAAAACACAAACCCATAACCCACCCACATATTAACGTTTCTCATTTAATATCTCATTCACCGGTCACTTAACTAATTAACTGTTAGTTAAGTGATCTAGTGTCGAAAAACATCTTAATTTAACCAAGTTTCAGTTATGCGTTCACATACACTCCCCTtcatatttatttggacagtgaagctaaaatgtTTGTTAATTTGGTACTATATTTGAGATCAGCATAGAATGTCACCACATATTTTTTTACCGATTAGAAATGAATGCACTTTATTTATCTAGTCCCCCttttgaaggtgtcataagtatttggtcaaattCACtcatacacagagtgtacaaaacattggtTAGGgatattcctctagtggtgtgggggctgtgctttggcaaagtgggtggggttatatcctgtctgtttggccctgtccgggggtgtcatcggatggggccacagtgtctcctgacccctcctgtctcagcctccagtatttatgctgcagtagtttatgtgttggggggctagggtcagtttgttatatctggagtatttctcctgtcttatccagtgtcctgagtgaatttaagtatatttttctctctctatctccatatCTCTCTACCTATCTATCTACGACATTGCTGATGAGTACTttctggccatgctgctgctccagattattattatttgaccatgctagtcatctatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccacccctcatagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaccgtgcttctacacctgcattgcttgctgtttggggttttaggctgggtttctgttccgcactttgagatatcagctgatatacgaagggctttactaaaaatacattttgattgattgattttcaaCACCtgctttccatgacacagactgaccaggtgaaagctatgatcccctattgatgccacttgttaaatacacttctgtcagtgtagatgaaggggtggagatcagttaaagaaggattttcaagccttgagacatttgagaAATGGAATGTCAGCAGATTGTCAATGACCTGTATGTAGGCAGGACTGGGACTATCAGATAGGATCTACACcactgctcttttctataacctgtatgtAGGAAGGACTGGGGTATGATCAGATAGGATCTACACCACTGCTCTTTTCTGTAACCTGTAGGTAACTGACGGGCCacacaaattgggatatgggggaggggaatggacATATGCAAATGTGGTATTAGCATTTGAATACcgtgtgtagtacagtattctacagtatacatttttttttaatagtaAGCGCTACATGATAGTGGGATAGTAcagagtgtagtatagtatactacagtttacagCAGAATACTATAGAATTCTATATATAGTAAGTACTAAAGTATTCTACAGAAACTGTATTATTTTTCATGTGGGTTGAAAGCTTCATAAAGTTAATAAACATTACTTACTATCATGGCCAATTTCCTTGCTACGTCTGTTTCCAGCAGTTGCCATATCTGACTTTGTTAATTGTCTTCCTCTTAGACGGTTCACTAGAAGCTGCAGATCTTATTTGTGTGCTGGAAAGGGAGAGGCTgtagaaacagaacacaaggaTGAATCATTAGACAGGATGATGTTAGTGGACCTAAGTGTTATCAAAGTGTAGCTATTTATAGTGTATTTGAAGGCCTACAGTTCCTTCGGAAAGTAtatagaccccttgacttttcccacattttgttacattttagaataaggctgtaatgtattacattgtttttcccctcatccatctacacacaataccccataatgcataAAGCagaaactgtttaaaaaaaatagttgcaaatgtatttaaaacaaaacaaacaccttatttacataagtattcagaccctttgctatgagactcgaaattgagctcaggtgcatcctgtttccattgataatccttaagatggttctacaacttgattggagtccacctgtggaaaatgtaattgattggacatgatttggaaaggcacacacctgtttatataaggtcccacagttcacagtgcatttccgagcagaaggacaaccatctctgcagtactccaccaatcaggcctttattgtagagtggtcagatagaagccactcttcagtaaaaggcacatgacagcccacttggagtttgtcaaaaggcacctaaagactctcagaccatgagaaacaatattctctggtctgatgaaaccaagattaaactttttggcctgaatgccaagcattaaGTCTgaagaaaacctggcaccatccctacggagaAGGGGgttcagcgtcagggactgggagactggtcaagatggagcaaagtaaagagaggtccttgataaaaacctgctccagagcactcaggacatcagagtactgagtgaagggtctgaatacttatgtaaatatgatatgtttttttatttgtaatacatttttagTTCAATTGaactaaaaacctgcttttgctttgtcatttttgggtattgtgtgtagtttgatgagggcAAAAAAactattcaatcaattttagaataaggctgtaatctaacaaaatgtggaaaaagtcaaggggtctgaatatgtgCTGCGTATTTATACTGaataaaatataaactcaacctgtaaagtgctggtcccatgtttcatgggctgaaataaaagatcccagaaatgtttcatgcAAAGcgaatttctctcaaattttgtgcacaaatttgtttacatccctgttggtgagcatttcgcctcaaaaattgaaagaatgtggcaccacaacaaacctgccaagagtggGCCGCCCacaaactcacggaccaggcaaggagggcattaatcagagaggcaacaaagagaccaaagataaccctgaaggagctgcaaagctccacagcggagattggagtatctgtccacaggacgactttaagctgtacactccacagagctgggctttacggaagagtggccagaaaaaaagccattgctttagAAAAACATAAGCAAACACATATGGTGTTCacaaaaaggcatgtgggagactccccaaacatattgaagaaggtactctggtcagaatAACATTtatctttttggccatcaaggaaaacgctatatcTGGCggaaacccaacacctctcatcacagtgaagcatggtgctggcagcatcatgctgtggggatgtttttcatttgcagggactgggaaactagtcagaattgaaggaatgatggatggtgctaaatacagggaaattcttgaggggaacctgtttcagtcttccaaagatttgagactgggatggaggttcacctttcagcaggacaatgaccctaagcacactgctaaagcaacactcaagtggtttaaggggaaacatttaaatgtcttggaatggcctggtcaaagcccagacctcaatccaattgagaatctgtggtatgacttaaagattgctgtacatcagcggaacccatccaactagAAAGggctggagcagttttgtcttgaatgggcaacaatcccagtggctagatgtgccaagcataaacagacataccccaagagacttgcagctgtatttgctgcaaaaggtggctctacaaagtctTGACATTgctggggtgaatagttatgcatgctcaagttctgtttttttgtctcatttcttgtttgtttcacaattaaaaatatttttcatcttcaaagtggtaggcatgttgtgtaactcaaatgatacaacccccacccccaaattctattttaattccaggttgtaaggcaacaaaatagtaaaaatgccaagggggtgaatacttttgcaagccactgtatctaGCACGTTGTTCTGTCAGGCATCAGGTAGTAttgtttgtttctttgttagaagcttctcttgttttgtattaGTTATCCTTAAAGTCACACTGCACTTGTTTCCTAACTCCCTGTGTCTACGTTACAGAATACTACCTCTCAAAATATTGAAGCGAGCAGAAGAGTTCTGGAACGATGCCCACGTGAGGCTCCAGTGTTACGTCCGCCGTCAGAAGAAGCAGGCAGattgccaccgcagtgaggctccAGTGTTCCGTCAGCCGTCAGAAGAAGCAGGCAGATTGCCATCACAGTGAGGCTCCACTGTTCCGTCCGCCGTCAGAAGAAGCAGGCAGATTGCCATCACAGTGAGGCTCCACTGTTCCGCCCGCCGTCAGAAGAAGCAGTCAGATTGCCATCACAGTGAGGCTCCACTGTTCCGCCCGCCGTCAGAAGAAGCAGGCAGattgccaccgcagtgaggctccAGTGTTCCATCCGCCGTCAGAAGAAGCAGGCAGATTGCCATCACAGTGAGGCTCCACTGTTCCGTCCGCCGTCAGAAGAAGCAGGCAGATTGCCATCACAGTGAGGCTCCACTGTTCCGTCCGCCGTCAGAAGAAGCAGGCAGATTGCCATCACAGTGAGGCTCCACTGTTCCGTCCGCCGTCAGAAGAAGCAGGCAGATTGCCATCACAGTGAGGCTCCACTGTTCTGTCCGCCGTCAGAAGAAGCAGGCAGATTGCCATCAGAGTGAGGCTCCACTGTTCCGACCGCCGTCAGAAGAAGCAGGCAGATTGCCACTGCAGTGAGGCTCCAGTGTTCTGTCCTCCGTCAGAAGAAGCAGGCAGATTGCTATCGCAGTGAGGCTCCACTGTTCCGTCCGCCGTCAGAAGAAGCAGGCAGATTGCCATCACAGTGAGGCTCCAGTGTTCCGTCCGCCGTCAGAAGAAGCAGGCAGattgccaccgcagtgagGCTCCAGTGTTCCGTCCGCCGTCAGAAGAAGCAGGCAGattgccaccgcagtgaggctccAGTGTTCCGACCGCCGTCAGAAGAAGCAGGCAGATTGCCATCACAGTGAGGCTCCACTGTTCCGTCCGCCGTCAGAAGAAGCAGGCAGattgccaccgcagtgaggctccAGTGTTCCGACCGCCGTCAGAAGAAGCAGGCAGattgccaccgcagtgaggctccAGTGTTCCGACCGCCGTCAGAAGAAGCAGGCAGATTGCCATCACAGTGAGGCTCCACTGTTCCGTCCGCCGTCAGAAGAAGCAGGCAGattgccaccgcagtgaggctccAGTGTTCCGCCCGCCGTCTGAAGAAGCAGGCAGattgccaccgcagtgaggctccCGTGTTCCATCTTGGTGATCGTGTCTGGCTCTCCACTAGGAACCttccactctgcctgccctgtaaGAACCTGAGTCCCCGGTTTGTGGGACCGTTCAAGGTCTTCTGGAGGGTCAATGAGGTGACATTTAGATTACAGCTCCCCGCTAACTATCGGAtccctcctcaggccggtggttcaTGGTCCCCTGACTGAGGCCGTCCACCACGACAGCCCTCCATCTCCCCTGGACATCGAGGGAAGCCCTGCCTATGCCGTCAGATCCCTCCTGGACTCCCGATATCGTTGGGGTTGgctccagtacctggtggacCGGGAGGGGCACAGTCCAGAAGAGCGGTGTTGGGTACCGATGGACAACATTCGAGATACATCTAAGATTTCTACCTTTGCTGACCGAACTGCTCCTCGCCCTCGGGGCATCCCTCTAATCGGTGTACTGTCACGTCTATTCCTGCTCGTCGTCGCCGGTCCTGGCAGCCCATCATAAAGAACACCTGCGCCCTATCATTAGACACACCTGGACTTAATCCCTACCCTGATTACTATTCCTATATCTAGTACTCTGTAACTTTTCTAAACCAGGCTGTATTGGTTCTGTTTTCATGTCAGACACTATTCTTGTTTTGTGTCGCTCCATGTTTGTTAATGTTAAACTCAccacctgcacctgcttcctgactcccttcgtCTCCATTACAGGTGTTATGTTAAAGTTACAATCTGCTATATTTACTGCTGTTCAAAGGTAATTTCAATAAATAATCTCAGTAGCCTACTACAAATGTGTTAACCCATCACACAGACGCAGACATATGCATAAGATAGCTAAAACTGACTCCATTGCAAACAGTAAAAGTATCACATAAACACACTATTGAATGATATACCCTATGTCATTTCCCCACAACAGCACCAATGATGAACTCCTGTAAAAACACTCAGCTGAATTACTGCAGGTCTGGTGGTGGTAGAACATCCAGAGGTGATGATGGTTGAGGGTTGTCTGAGGACAGCTTCAAGGG

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU882109 True 7092 lncRNA 0.45 2 14114285 14123191

Neighbor

gene id symbol gene type direction distance location
LOC110531545 NA coding downstream 26010 14070035 ~ 14088275 (-)
LOC110532929 LOC106578030 coding downstream 69772 14042284 ~ 14044513 (-)
LOC110531540 LOC106594400 coding downstream 74556 14033558 ~ 14039729 (-)
LOC110532928 NA coding downstream 83501 14028919 ~ 14030784 (-)
LOC110531549 NA coding downstream 88960 14022650 ~ 14025846 (-)
ndrg2 LOC106577998 coding upstream 31158 14154349 ~ 14191312 (-)
LOC110531544 LOC106577997 coding upstream 90255 14213446 ~ 14223844 (-)
si:ch211-63p21.2 LOC106578003 coding upstream 102594 14225785 ~ 14231094 (-)
LOC118966145 LOC106599223 coding upstream 126343 14249401 ~ 14254157 (-)
LOC110532998 NA coding upstream 132288 14255479 ~ 14259219 (-)
G774159 NA non-coding downstream 11469 14075965 ~ 14102816 (-)
G774158 NA non-coding downstream 39688 14074355 ~ 14074597 (-)
LOC110531539 NA non-coding downstream 112267 13988898 ~ 14002060 (-)
G773405 NA non-coding downstream 176912 13936934 ~ 13937373 (-)
LOC110531554 LOC106578008 non-coding upstream 188269 14311455 ~ 14405052 (-)
G774281 NA non-coding upstream 213328 14336519 ~ 14336804 (-)
G774285 NA non-coding upstream 217069 14340260 ~ 14340725 (-)
G774294 NA non-coding upstream 237764 14360955 ~ 14361175 (-)
G774246 NA non-coding upstream 248155 14371346 ~ 14371628 (-)
LOC110531538 NA other downstream 126703 13977459 ~ 13987582 (-)
G773168 NA other downstream 414957 13697179 ~ 13699328 (-)
G773163 NA other downstream 522197 13586326 ~ 13666937 (-)
G772877 LOC106577934 other downstream 1117875 12994269 ~ 12996410 (-)
G771614 NA other downstream 2142931 11970904 ~ 11971354 (-)
G774427 LOC106578022 other upstream 600863 14724054 ~ 14724522 (-)
G774562 LOC106577809 other upstream 1114867 15238058 ~ 15253973 (-)
G774702 LOC106577875 other upstream 1229116 15352307 ~ 15361319 (-)
G774954 NA other upstream 1502011 15625202 ~ 15625920 (-)

Expression


Co-expression Network