XLOC_026943 (tmem181)


Basic Information

Item Value
gene id XLOC_026943
gene name tmem181
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 357810 ~ 386168 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053211
ACGTGACAGCCCCCTGCGCGCCCCTGTGTGCTCGTGCGCTCAGCAGATCCTCGAACCTGCACCATTGAAGCGCTTCGTCCGCATTTCCAGTCAACAGAGCCGCCAGAAACAACCGTGAAACGCCATTTATTTACCTCCAGCGGAGATGGAGCGGGTGGAGGCCGAGTTCTGCAGCATGGAGAACCCGCTGGTCGGGGAAATGAAGCGCTTCTGCAGGAACATCACTGAAGCCTGCAATGAGCTGAAGGAGGAGCTGACGCCGTACAGGAATGAGCGATTCTACAGaTTGGCCCCGATGCGTCTCTACACTCTCTCCAAGAGACACTTCGTGCTGGTGTTTGTGGTCTTCTTCTTCTGCTTCGGCCTCTCCACCCTCATCGGTTTGTCAGGTGAGATCTCCACTTACCTGATTCTGTTTCTTAGCAACAGTCAAGATGCTCTATAGTAGATCACAATTCAGAGTCCAGAATCACACCACAAGAAAAACACGAAATGTTTAGCTTGTGTAGAGACTGCCAACTTTTGGGGGACCCAtgtcaattattattgtttttgctttattaaaGGAGCATAAAAGCACTAtaatatgtgtgcagatatttagaaacattcttgtttatctgaaaaacactgctgaagtcagatattctgctttgaacatgtgcTTTACGTGCCGGagcggctgtctttgttttggtcatttaacccacccactgccaTTTTAGCCcactatatttcagcaccccgggttgccagatggtggaaaacagcgtatttcattcactCAGTCTGAAAGACTCTCGAAGTGtgccttcatgactgaaatgcgccctctggtggacagtagcagactctgaaatgagatacAG
>TCONS_00053212
ACGTGACAGCCCCCTGCGCGCCCCTGTGTGCTCGTGCGCTCAGCAGATCCTCGAACCTGCACCATTGAAGCGCTTCGTCCGCATTTCCAGTCAACAGAGCCGCCAGAAACAACCGTGAAACGCCATTTATTTACCTCCAGCGGAGATGGAGCGGGTGGAGGCCGAGTTCTGCAGCATGGAGAACCCGCTGGTCGGGGAAATGAAGCGCTTCTGCAGGAACATCACTGAAGCCTGCAATGAGCTGAAGGAGGAGCTGACGCCGTACAGGAATGAGCGATTCTACAGaTTGGCCCCGATGCGTCTCTACACTCTCTCCAAGAGACACTTCGTGCTGGTGTTTGTGGTCTTCTTCTTCTGCTTCGGCCTCTCCACCCTCATCGGTTTGTCAGGACCAAAGATCATAAGTGAGAATCATTACAACGGGCTGAGCGTCAGCCCCAACGGCTCCAAGATCGGCCCGTTTGCCTTCTCATCTCCGCCGCTGTCCAACTATAACCAGCAGCTGTGGCTCACGTGCATCATTGAGCTTCAGAACAACAATCTGAGCTGGCGGGAGTTCGGGATGAATGTGGAGCTGCAGGGTGTGGTGCAGGACACCAGTGTGATGCGCATCAGTGACAACGTGCACAACAGGAACAGAAGCCTGCACTGCTCCGCTGCGTGTGATGAGATCATCGTCCTGCATCTGGGTTATCTGAACTACACTCAGTACAAGATCAACGTCAGCTTCAGGAATCTGCAGGACGACCTCAAGGACAACATCAAGAATGTGACTTTTGTGTTTAAGATGTACCAGGACACCTTCTCTCAGATGGAGATCTGGTTCCGCTTTGTGTTTGTGGTGATGACCTTTATAGTCACTTGTATGTTTGCGCACTCTCTGAGGAAGTTCTCCATGAGGGATTGGGGAATCGAGCAGAAGTGGATGTCCATCCTCTTGCCGCTGCTGCTGCTCTACAATGACCCGTTCTTCCCGCTGTCGTTCCTGGTCAACAGCTGGTTTCCAGGAACTCTGGATGCATTTCTCCAGGCTGTGTTTCTGTGCGCGCTGCTGCTGTTCTGGCTGTGTGTTTACCACGGTATCAGAGTTCAGGGTGAGAGGCGGTTTCTGACTTTTTACCTGCCCAAGCTGCTGATGGTGGGCCTGCTGTGGTTATCAGCCGTAACGCTGGGAATCTGGCAGACggTGAATGAGCTGCAGGATCCTACATATCAGTATAAAGTGGACATCCAGAACTTCCAGggcatGAAGATCTTCTTCCTGctggtggtgtgtgtgtatgtgctgtaTCTGGTGTTTCTGGTGGTCCGCGCCTGCTCAGAGCTGAAGAATATGCCATATTCAGATCTGAGGCTCAAGTTCCTGACGGCACTGACACTGGTGGTGCTGGTGAtcagTGTGATCATCCTCTACCTGCGGTTCGGCTCCAAGGCGCTACAAGACAACTTCGTAGCTGAACTGTCAACTCACTACCAGAACTCCGAGTTTCTCTCCTTCTACGGTCTGCTGAACTTCTATCTCTACACACTAGCGTTCGTTTACTCGCCCTCCAAAAACGCTCTTTACGATTCACAGCTGAAGGACAATCCTGCGTTCTCCATGCTCAATGACTCTGATGATGAAGTGATttatggGAGCGATTATGAAGAAATGCCTCTTCAAAACGGACGCGCCATCAAAGCCACGGCCAAATACCAGGACGAGAGCGACAGCGACTGAAGCCGTGTCTTAAACTGAGTGTAAATATACAGGCCAGAAGTCTATTTTTAAAGCTGTGGTGTTGAATGTAACTCCTGATGTGGATCTGACAGTAGGAAAGCCACAGATCTGATGGAGAAAAATCCAAACACTGTTCAGGTGAATGCGCACAACCAACATTTCAGGTTATATTCCAGCTCAAAGCACTTCATATTTGGAGGAAAGatattatatatgttttgttCTGTCACATTTACATCATGAAATGAACATATTTATAAGTGATATCTGCATGCATTACATTTAGgattataaattatacatttattttgtaatataacAATGAATGCAcatattaaaactatttagttGTAGATTTTACTGCACTTTAAAAGAAATGTAATGTAACGGCTCCATAAAACGAAAAAAGCATgcacataatttattttatatattaaatattttattttaataaatcaaatgtattatAAATTGAATTATAAATTACTACATAATAAGATATTATAAAAaacagagtaataataataataataaatacttgaAATAATCATAGATATATTCTCTGTATTGAGCTTTTGGGCTGAAATATAACCTTCATATCTCTTGCCAGCATTCACTTGATATTTCCTTAATATTTTCTGCCATCAGGCTAGAGTCGAGGAGGGTTTTGTgcatatatttcaatatttccAGGCTCATTTGAGCTGTTTATTTGCCAATATTGAGATCCGCTGTGCTCATGTGAGTTCTCTTTTGTACTTCTGTTTGTTTTCCACTTTATTTTGTACAGTTTTCCACTCCTTGCTCACATTCCTCCGGCGATTTCTTCGATTGTTGTGCCTGTAGACATGTTTCCTcttgtgtatttattcttttgtggGTCAGGATGTGTTGAATGAAGCtgtggtgtgtttgtgttgaAGCGAGTCCTGGAGTGTGAGACGCAGATCGGTGGGTTTGTGGAAGCGCTGCTCCATTAGTGTTGATCAGTTCTGGGTTTTGTGCCTTTCCACATGTTCATCATCTTACAGGAGCCGCTGTGGAGGAAACCctcaataaaacacacacagctgcttTTAG
>TCONS_00053213
GCGCGCCCCTGTGTGCTCGTGCGCTCAGCAGATCCTCGAACCTGCACCATTGAAGCGCTTCGTCCGCATTTCCAGTCAACAGAGCCGCCAGAAACAACCGTGAAACGCCATTTATTTACCTCCAGCGGAGATGGAGCGGGTGGAGGCCGAGTTCTGCAGCATGGAGAACCCGCTGGTCGGGGAAATGAAGCGCTTCTGCAGGAACATCACTGAAGCCTGCAATGAGCTGAAGGAGGAGCTGACGCCGTACAGGAATGAGCGATTCTACAGaTTGGCCCCGATGCGTCTCTACACTCTCTCCAAGAGACACTTCGTGCTGGTGTTTGTGGTCTTCTTCTTCTGCTTCGGCCTCTCCACCCTCATCGGTTTGTCAGGACCAAAGATCATAAGTGAGAATCATTACAACGGGCTGAGCGTCAGCCCCAACGGCTCCAAGATCGGCCCGTTTGCCTTCTCATCTCCGCCGCTGTCCAACTATAACCAGCAGCTGTGGCTCACGTGCATCATTGAGCTTCAGAACAACAttgtAGATCTGAGCTGGCGGGAGTTCGGGATGAATGTGGAGCTGCAGGGTGTGGTGCAGGACACCAGTGTGATGCGCATCAGTGACAACGTGCACAACAGGAACAGAAGCCTGCACTGCTCCGCTcatcAGCAGGCGTGTGATGAGATCATCGTCCTGCATCTGGGTTATCTGAACTACACTCAGTACAAGATCAACGTCAGCTTCAGGAATCTGCAGGACGACCTCAAGGACAACATCAAGAATGTGACTTTTGTGTTTAAGATGTACCAGGACACCTTCTCTCAGATGGAGATCTGGTTCCGCTTTGTGTTTGTGGTGATGACCTTTATAGTCACTTGTATGTTTGCGCACTCTCTGAGGAAGTTCTCCATGAGGGATTGGGGAATCGAGCAGAAGTGGATGTCCATCCTCTTGCCGCTGCTGCTGCTCTACAATGACCCGTTCTTCCCGCTGTCGTTCCTGGTCAACAGCTGGTTTCCAGGAACTCTGGATGCATTTCTCCAGGCTGTGTTTCTGTGCGCGCTGCTGCTGTTCTGGCTGTGTGTTTACCACGGTATCAGAGTTCAGGGTGAGAGGCGGTTTCTGACTTTTTACCTGCCCAAGCTGCTGATGGTGGGCCTGCTGTGGTTATCAGCCGTAACGCTGGGAATCTGGCAGACggTGAATGAGCTGCAGGATCCTACATATCAGTATAAAGTGGACATCCAGAACTTCCAGggcatGAAGATCTTCTTCCTGctggtggtgtgtgtgtatgtgctgtaTCTGGTGTTTCTGGTGGTCCGCGCCTGCTCAGAGCTGAAGAATATGCCATATTCAGATCTGAGGCTCAAGTTCCTGACGGCACTGACACTGGTGGTGCTGGTGAtcagTGTGATCATCCTCTACCTGCGGTTCGGCTCCAAGGCGCTACAAGACAACTTCGTAGCTGAACTGTCAACTCACTACCAGAACTCAGCCGAGTTTCTCTCCTTCTACGGTCTGCTGAACTTCTATCTCTACACACTAGCGTTCGTTTACTCGCCCTCCAAAAACGCTCTTTACGATTCACAGCTGAAGGACAATCCTGCGTTCTCCATGCTCAATGACTCTGATGATGAAGTGATttatggGAGCGATTATGAAGAAATGCCTCTTCAAAACGGACGCGCCATCAAAGCCACGGCCAAATACCAGGACGAGAGCGACAGCGACTGAAGCCGTGTCTTAAACTGAGTGTAAATATACAGGCCAGAAGTCTATTTTTAAAGCTGTGGTGTTGAATGTAACTCCTGATGTGGATCTGACAGTAGGAAAGCCACAGATCTGATGGAGAAAAATCCAAACACTGTTCAGGTGAATGCGCACAACCAACATTTCAGGTTATATTCCAGCTCAAAGCACTTCATATTTGGAGGAAAGatattatatatgttttgttCTGTCACATTTACATCATGAAATGAACATATTTATAAGTGATATCTGCATGCATTACATTTAGgattataaattatacatttattttgtaatataacAATGAATGCAcatattaaaactatttagttGTAGATTTTACTGCACTTTAAAAGAAATGTAATGTAACGGCTCCATAAAACGAAAAAAGCATgcacataatttattttatatattaaatattttattttaataaatcaaatgtattatAAATTGAATTATAAATTACTACATAATAAGATATTATAAAAaacagagtaataataataataataaatacttgaAATAATCATAGATATATTCTCTGTATTGAGCTTTTGGGCTGAAATATAACCTTCATATCTCTTGCCAGCATTCACTTGATATTTCCTTAATATTTTCTGCCATCAGGCTAGAGTCGAGGAGGGTTTTGTgcatatatttcaatatttccAGGCTCATTTGAGCTGT
>TCONS_00053214
GTGACGTCAGTGGGCTGATGTGTGCGGATATGCGCCGCCAGCGAACAGTATTCTCTGATTTATTTCCGTCGCCGGTGGGATAAAATCAACGCGATGGAGCGaTTGGCCCCGATGCGTCTCTACACTCTCTCCAAGAGACACTTCGTGCTGGTGTTTGTGGTCTTCTTCTTCTGCTTCGGCCTCTCCACCCTCATCGGTTTGTCAGGACCAAAGATCATAAGTGAGAATCATTACAACGGGCTGAGCGTCAGCCCCAACGGCTCCAAGATCGGCCCGTTTGCCTTCTCATCTCCGCCGCTGTCCAACTATAACCAGCAGCTGTGGCTCACGTGCATCATTGAGCTTCAGAACAACAttgtAGATCTGAGCTGGCGGGAGTTCGGGATGAATGTGGAGCTGCAGGGTGTGGTGCAGGACACCAGTGTGATGCGCATCAGTGACAACGTGCACAACAGGAACAGAAGCCTGCACTGCTCCGCTcatcAGCAGGCGTGTGATGAGATCATCGTCCTGCATCTGGGTTATCTGAACTACACTCAGTACAAGATCAACGTCAGCTTCAGGAATCTGCAGGACGACCTCAAGGACAACATCAAGAATGTGACTTTT

Function

symbol description
tmem181 Predicted to enable toxic substance binding activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM181 (transmembrane protein 181).

GO:

id name namespace
GO:0042407 cristae formation biological_process
GO:0061024 membrane organization biological_process
GO:0051641 cellular localization biological_process
GO:0099041 vesicle tethering to Golgi biological_process
GO:0044424 obsolete intracellular part cellular_component
GO:0044431 obsolete Golgi apparatus part cellular_component
GO:0005794 Golgi apparatus cellular_component
GO:0005802 trans-Golgi network cellular_component
GO:0031300 intrinsic component of organelle membrane cellular_component
GO:0031301 integral component of organelle membrane cellular_component
GO:0044464 obsolete cell part cellular_component
GO:0000139 Golgi membrane cellular_component
GO:0012505 endomembrane system cellular_component
GO:0005622 intracellular anatomical structure cellular_component
GO:0005623 obsolete cell cellular_component
GO:0031984 organelle subcompartment cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0098791 Golgi apparatus subcompartment cellular_component
GO:0005737 cytoplasm cellular_component
GO:0015643 toxic substance binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060503-309 Predicted to enable toxic substance binding activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM181 (transmembrane protein 181).

Ensembl:

ensembl_id ENSDARG00000045910

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053211 False 869 lncRNA 0.48 2 357810 362805
TCONS_00053212 False 2800 mRNA 0.45 17 357810 386168
TCONS_00053213 False 2431 mRNA 0.45 17 357825 385796
TCONS_00053214 True 609 mRNA 0.53 6 359970 367982

Neighbor

gene id symbol gene type direction distance location
XLOC_026942 tulp4a coding upstream 3886 331351 ~ 353924 (+)
XLOC_026941 si:ch211-51e12.7 coding upstream 39839 308688 ~ 317971 (+)
XLOC_026940 msgn1 coding upstream 49804 306036 ~ 308006 (+)
XLOC_026939 FO834823.1 coding upstream 65779 288633 ~ 292031 (+)
XLOC_026938 CABZ01085275.1 coding upstream 74950 279669 ~ 282860 (+)
XLOC_026944 rpl18a coding downstream 5129 391297 ~ 398451 (+)
XLOC_026945 BX890562.1 coding downstream 7598 393766 ~ 393902 (+)
XLOC_026946 NA coding downstream 12349 398517 ~ 402485 (+)
XLOC_026947 BX890562.2 coding downstream 16458 402626 ~ 499946 (+)
XLOC_026948 BX890562.4 coding downstream 33491 419659 ~ 419774 (+)
XLOC_026937 NA non-coding upstream 110841 246350 ~ 246969 (+)
XLOC_026934 NA non-coding upstream 281139 74199 ~ 76671 (+)
XLOC_026949 AL845512.1 non-coding downstream 168099 554267 ~ 554384 (+)

Expression


Co-expression Network