G773811 (LOC106578037)


Basic Information

Item Value
gene id G773811
gene name LOC106578037
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 14795963 ~ 14801127 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU881668
ctccctttgcttctataatagcctccactcttctgggaaggctttccactagatgttggaacattgctgtggggacttactTCCATTAAGCCACAAGAGCCTTaatgaggtcaggcactgatgttgggcgattaggcctggcttgcagtcgacattccaattcatcccaaaggtgttcgatggggttgaggttagggctctgagCAGGcttgtcaagttcttccacaccaatctcgacaaaccatttctgtacggacctcactttgtgcatgggggcattgacatactgaaacaggaaagggccttccccaaactgtagccacaaagttggaagcacaaaatggtttacaatgtcattgtattctgtagctttaagatttcccttcactggaactaaggggcctagctcaaaccatgaaaaacagccccagatttGACAGTTGGCACCGTGCATTGAGGCAGGTAGCgatctcctggcatccaccaaattcGCATATTCGTCCGGACTGCTATGCGCTTCAACActctgcggtcctgttctgtgagcttgtgtgacctaccacttcgcggctgagccactgttgctcctagacatttccacttcacaataacagcagtcacagttgaccagggcagccttAGCAGGGCAAAAatggaactgacttgttggaaaggtggcatcctatgaaggtgccacgttgaaagtctgagctcttcagtaaggccattcaactgccaatgtttgtctatggaggttgcatggctgtgtaatcgattttatacacctgtcagcaacgggtgtggctgaaatagacataTTGACTgacttgaaggggtgtccatgtccttttgtatatatagtgtactacacCTCCAATCTTACCTGCTCCTGGTGACTCTCTATGATGACCAGGTGTCCTCCATCGTGGATGCAGGCGTACTGACTCTGTCCCCAGGTCATTTTTTCTTTAGAGAAGTAGTAACATGATCCATTGTAGAACTCCCAGCCAGGAGAACACAGCTGACTGGTATTACATCTCTTCTGATTCCCTTGGATGGTTGCCAGGAGATCTTTGACCCTAGTAAGGTTGGCATTACAGTCTTGTAGCTCTGAGGATAACAGGTCTCTCTGGATTGTTACGTTGTGGGTCTCATTCTGTAGTCTCTTATAGCTGTCTTGCAGTTCATGCAGTTTCCCTGTTAGATTCTCTTTCATCTGGGCAAAGCGAGCCCCCTCAGCTTGAAGACTAGTCATGTTGGAAGCATAGAGGATTCCCAGAGTGATCGCCAGGCCCAGCagtagaacacagagacacatcagGGTCACCACGGGAACTCTCCCATACCCTCCCTCAGGGATTGTAGCCTTTGACCCCACTGGGGGAGTGGGGTCACTATTGCCATGGTCCCTTCCTGTAAAAGGAGTGGGTGTCAGAGATTAAAAGGTCATAAGGTTTGTTATATTCGGGGTAAACATTGAACATTGAGACATTAAAGACATGATAGATCAGACGCATAGTGAATACGAAATGGAAGAGACTGGGTTTTATGTCAGGAGGTGGTGGGTCTCTGCAGAAAGACAGaaggctttggaatgtgttgggtggacgGGAGGAGACCACTGGATTGCTATAGGGGAAGCGGATGGACATCTGTGTATTAGGCGAAGGaggagttgaggtcaggaggtcaggtcagatcccctgaaggAAGTAATAAGGGTTTATTATCCTAGTACCCTCTTCCCGTggaaccataagatgtaaggattggagagaaggaggagtgtccaaagtggagtatatatacttgtgtgacttgtctgaattacagctgtaacgaccctttgggaagaattaaacttggttaaagttTCTCTGGTGTctgtgagttatttactctgaaaattaGAGTTAATTAAGGGGTACTTAATGTAACCCTTAGCTAACTGTAACACAAATACATCTCACCTTTCCCAGGATCCTTCTGCTCACTAGCTCTACCTCCCGGTCTTTTAACCTCAGAGTATGTGATATCCTCTTCACG

Function

NR:

description
asialoglycoprotein receptor 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU881668 True 2046 lncRNA 0.47 5 14795963 14801127

Neighbor

gene id symbol gene type direction distance location
LOC110531582 LOC106578023 coding upstream 32460 14756863 ~ 14763503 (+)
LOC110532934 LOC106578022 coding upstream 55518 14716449 ~ 14740445 (+)
LOC110531583 LOC106578020 coding upstream 108232 14649303 ~ 14687731 (+)
LOC110532932 LOC106578030 coding upstream 366155 14421167 ~ 14429808 (+)
LOC110531556 LOC106578006 coding upstream 419676 14364241 ~ 14376287 (+)
LOC110531580 LOC106578024 coding downstream 15168 14816295 ~ 14825244 (+)
LOC110532999 LOC106578032 coding downstream 48513 14849640 ~ 14852485 (+)
LOC110531577 LOC106578038 coding downstream 63463 14864590 ~ 14889244 (+)
LOC118966162 LOC106578024 coding downstream 103880 14905007 ~ 14912257 (+)
LOC118965998 NA coding downstream 146128 14947255 ~ 14949071 (+)
G773761 NA non-coding upstream 62511 14728870 ~ 14733452 (+)
G773752 NA non-coding upstream 95451 14700214 ~ 14700512 (+)
G773739 NA non-coding upstream 137961 14656708 ~ 14658002 (+)
G773730 NA non-coding upstream 165759 14629780 ~ 14630204 (+)
G773871 NA non-coding downstream 118091 14919218 ~ 14920221 (+)
G773917 NA non-coding downstream 302730 15103857 ~ 15111275 (+)
G773918 NA non-coding downstream 306454 15107581 ~ 15108957 (+)
G773940 NA non-coding downstream 357672 15158799 ~ 15219494 (+)
G773808 NA non-coding downstream 363309 15164436 ~ 15236467 (+)
G773601 NA other upstream 411797 14382670 ~ 14384166 (+)
G773583 NA other upstream 470130 14306630 ~ 14328474 (+)
G773562 LOC106577828 other upstream 480713 14311468 ~ 14315250 (+)
G773535 LOC106577997 other upstream 579111 14213449 ~ 14216852 (+)
G773437 NA other upstream 767435 14024873 ~ 14028528 (+)
G773983 LOC106577853 other downstream 497331 15291949 ~ 15299214 (+)
G774021 NA other downstream 574097 15375224 ~ 15377188 (+)
G774065 NA other downstream 664233 15465360 ~ 15465624 (+)
LOC110531590 LOC106577858 other downstream 670380 15471215 ~ 15505643 (+)
G775142 NA other downstream 1064962 15866089 ~ 15866708 (+)

Expression


Co-expression Network