G773871


Basic Information

Item Value
gene id G773871
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 14919218 ~ 14920221 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU881730
CCTCagactgcatttacacaggcagtccaattctgaATTGTTGCCTAATTATCAGCAAAAGagatgatctgattggtcaaaagcaGTGGAGTCAAAATGCAgataaaaatagtaacacaagaggaaaaaaatcaaatacacaagaatggagcaatatacagggagaaccagtatcagatcaatgtgaggctatatacagggagtaccagtaccagatcaatgtgaggctatatacagggagaaccagtaccagatcaatgtgaggctatatacagggagtaccagtaccagatcaatgtgaggctatatacagggagaaccagtaccagatcaatgtgaggctatatacagggagtaccagtatcagatcaatgtgaggctatatacagggagtaccagtaccagatcaatgtgaggctatatacagggagtaccagtatcagatcaatgtgaggctatatacagggagtaccagtaccagatcaatgtgaggctatatacagggagtaccagtaccagatcaatgtgaggctatatacaggggtacc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU881730 True 548 lncRNA 0.42 2 14919218 14920221

Neighbor

gene id symbol gene type direction distance location
LOC118966162 LOC106578024 coding upstream 6961 14905007 ~ 14912257 (+)
LOC110531577 LOC106578038 coding upstream 29974 14864590 ~ 14889244 (+)
LOC110532999 LOC106578032 coding upstream 66733 14849640 ~ 14852485 (+)
LOC110531580 LOC106578024 coding upstream 93974 14816295 ~ 14825244 (+)
LOC110531582 LOC106578023 coding upstream 155715 14756863 ~ 14763503 (+)
LOC118965998 NA coding downstream 27034 14947255 ~ 14949071 (+)
LOC110531575 NA coding downstream 29216 14949437 ~ 14972051 (+)
LOC118936439 LOC106596013 coding downstream 165460 15085681 ~ 15185946 (+)
LOC118965999 LOC106596013 coding downstream 297376 15217597 ~ 15248137 (+)
LOC110531573 LOC106577850 coding downstream 332244 15252465 ~ 15262643 (+)
G773811 LOC106578037 non-coding upstream 118091 14795963 ~ 14801127 (+)
G773761 NA non-coding upstream 185766 14728870 ~ 14733452 (+)
LOC110532934 LOC106578022 non-coding upstream 195360 14716449 ~ 14740445 (+)
G773752 NA non-coding upstream 218706 14700214 ~ 14700512 (+)
G773739 NA non-coding upstream 261216 14656708 ~ 14658002 (+)
G773917 NA non-coding downstream 183636 15103857 ~ 15111275 (+)
G773918 NA non-coding downstream 187360 15107581 ~ 15108957 (+)
G773940 NA non-coding downstream 238578 15158799 ~ 15219494 (+)
G773808 NA non-coding downstream 244215 15164436 ~ 15236467 (+)
G773950 NA non-coding downstream 278543 15198764 ~ 15217371 (+)
G773601 NA other upstream 535052 14382670 ~ 14384166 (+)
G773583 NA other upstream 593385 14306630 ~ 14328474 (+)
G773562 LOC106577828 other upstream 603968 14311468 ~ 14315250 (+)
G773535 LOC106577997 other upstream 702366 14213449 ~ 14216852 (+)
G773437 NA other upstream 890690 14024873 ~ 14028528 (+)
G773983 LOC106577853 other downstream 378237 15291949 ~ 15299214 (+)
G774021 NA other downstream 455003 15375224 ~ 15377188 (+)
G774065 NA other downstream 545139 15465360 ~ 15465624 (+)
LOC110531590 LOC106577858 other downstream 551286 15471215 ~ 15505643 (+)
G775142 NA other downstream 945868 15866089 ~ 15866708 (+)

Expression


Co-expression Network