G774568


Basic Information

Item Value
gene id G774568
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 14964991 ~ 14966005 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU882583
CTTTCTTTTTTTTGTCCAACTTTTTCAGTTGAATCTGGGCGTAAGTCACATGACTTGGTCCAGCAGTAGAAGCACCAGCAGCATCATTATCATTGTTGTCTGAGGAATTGATTGTATCGTAGATGTTAGCGTCACCATGTTGCTGATGTGTATACCCAGATCCTTGGTCCTGTTGGGGGCCCTGGTTGGTGCTCTGGGGCTGAGGGGGCCAGAATATTCTGTTGGAACAGGAACCTGTGCTGTTTTTATATCTCACCAACAGCACCAGGAGAATGACCAGTAGGACACCAGCAACAAGCAGACCCACAACCACTCCTACTAGGACTGATGTAGAGGATCCAGGAGCTacgactggagagactggagagggaaCAGCACAACACCATCAGACTCTgaggtggaaaataaataaagtaatTAAATTCCTGTATGTATCTGAGACTGGCGAGACtggagagag

Function

NR:

description
basement membrane-specific heparan sulfate proteoglycan core protein-like isoform X24

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU882583 True 460 lncRNA 0.47 5 14964991 14966005

Neighbor

gene id symbol gene type direction distance location
LOC110531581 LOC106578037 coding downstream 161779 14792676 ~ 14803212 (-)
LOC110531584 LOC106578021 coding downstream 272624 14687934 ~ 14692367 (-)
LOC110531585 LOC106608993 coding downstream 318237 14633925 ~ 14646754 (-)
LOC110531563 LOC106578017 coding downstream 338176 14531994 ~ 14626815 (-)
LOC110531564 LOC106578016 coding downstream 433487 14509040 ~ 14531504 (-)
LOC118966000 LOC106578026 coding upstream 52026 15018031 ~ 15035380 (-)
LOC110531572 LOC106577851 coding upstream 298161 15264166 ~ 15268722 (-)
LOC110531571 LOC106577852 coding upstream 304185 15270190 ~ 15281871 (-)
LOC118966001 NA coding upstream 318306 15284311 ~ 15285624 (-)
LOC110531570 LOC106577853 coding upstream 319878 15285883 ~ 15321030 (-)
G774518 NA non-coding downstream 84380 14874037 ~ 14880611 (-)
G774513 LOC106578038 non-coding downstream 88115 14864354 ~ 14876876 (-)
G774491 NA non-coding downstream 130104 14834623 ~ 14834887 (-)
G774485 NA non-coding downstream 137430 14827169 ~ 14827561 (-)
G774432 NA non-coding downstream 222014 14742681 ~ 14742977 (-)
G774569 NA non-coding upstream 591 14966596 ~ 14970855 (-)
G774570 NA non-coding upstream 5628 14971633 ~ 15186606 (-)
G774580 NA non-coding upstream 26527 14992532 ~ 15142671 (-)
G774613 NA non-coding upstream 128784 15094789 ~ 15176183 (-)
G774526 NA non-coding upstream 129055 15095060 ~ 15167011 (-)
G774427 LOC106578022 other downstream 240469 14724054 ~ 14724522 (-)
LOC118966145 LOC106599223 other downstream 710834 14249401 ~ 14254157 (-)
LOC110531538 NA other downstream 977409 13977459 ~ 13987582 (-)
G773168 NA other downstream 1265663 13697179 ~ 13699328 (-)
G773163 NA other downstream 1372903 13586326 ~ 13666937 (-)
G774562 LOC106577809 other upstream 272053 15238058 ~ 15253973 (-)
G774702 LOC106577875 other upstream 386302 15352307 ~ 15361319 (-)
G774954 NA other upstream 659197 15625202 ~ 15625920 (-)
LOC110531603 groa other upstream 816352 15781909 ~ 15787666 (-)
G775139 NA other upstream 896315 15862320 ~ 15863834 (-)

Expression


Co-expression Network