Gene
RNA
| Item | Value |
|---|---|
| gene id | G773940 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 15158799 ~ 15219494 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU881815 | False | 356 | lncRNA | 0.39 | 3 | 15158799 | 15163666 |
| TU881814 | False | 279 | lncRNA | 0.41 | 4 | 15158919 | 15219494 |
| TU881816 | True | 254 | lncRNA | 0.43 | 2 | 15161878 | 15163666 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531575 | NA | coding | upstream | 186748 | 14949437 ~ 14972051 (+) |
| LOC118965998 | NA | coding | upstream | 209728 | 14947255 ~ 14949071 (+) |
| LOC118966162 | LOC106578024 | coding | upstream | 246542 | 14905007 ~ 14912257 (+) |
| LOC110531577 | LOC106578038 | coding | upstream | 269555 | 14864590 ~ 14889244 (+) |
| LOC110532999 | LOC106578032 | coding | upstream | 306314 | 14849640 ~ 14852485 (+) |
| LOC110531573 | LOC106577850 | coding | downstream | 32971 | 15252465 ~ 15262643 (+) |
| LOC118966002 | NA | coding | downstream | 123430 | 15342924 ~ 15348526 (+) |
| LOC110533001 | LOC106577875 | coding | downstream | 132788 | 15352282 ~ 15362094 (+) |
| LOC110531590 | LOC106577858 | coding | downstream | 251721 | 15471215 ~ 15505643 (+) |
| si:ch211-168d1.3 | LOC106577859 | coding | downstream | 304062 | 15523556 ~ 15561336 (+) |
| G773917 | NA | non-coding | upstream | 47524 | 15103857 ~ 15111275 (+) |
| G773918 | NA | non-coding | upstream | 49842 | 15107581 ~ 15108957 (+) |
| G773871 | NA | non-coding | upstream | 238578 | 14919218 ~ 14920221 (+) |
| G773811 | LOC106578037 | non-coding | upstream | 357672 | 14795963 ~ 14801127 (+) |
| G773761 | NA | non-coding | upstream | 425347 | 14728870 ~ 14733452 (+) |
| LOC118965999 | LOC106596013 | non-coding | downstream | 10278 | 15217597 ~ 15248137 (+) |
| G773799 | LOC106577851 | non-coding | downstream | 43287 | 15262781 ~ 15268676 (+) |
| G773973 | NA | non-coding | downstream | 56154 | 15275648 ~ 15276137 (+) |
| G773977 | NA | non-coding | downstream | 59381 | 15278875 ~ 15279216 (+) |
| G773979 | NA | non-coding | downstream | 60486 | 15279980 ~ 15280260 (+) |
| G773601 | NA | other | upstream | 774633 | 14382670 ~ 14384166 (+) |
| G773583 | NA | other | upstream | 832966 | 14306630 ~ 14328474 (+) |
| G773562 | LOC106577828 | other | upstream | 843549 | 14311468 ~ 14315250 (+) |
| G773535 | LOC106577997 | other | upstream | 941947 | 14213449 ~ 14216852 (+) |
| G773437 | NA | other | upstream | 1130271 | 14024873 ~ 14028528 (+) |
| G773983 | LOC106577853 | other | downstream | 78964 | 15291949 ~ 15299214 (+) |
| G774021 | NA | other | downstream | 155730 | 15375224 ~ 15377188 (+) |
| G774065 | NA | other | downstream | 245866 | 15465360 ~ 15465624 (+) |
| G775142 | NA | other | downstream | 646595 | 15866089 ~ 15866708 (+) |
