XLOC_026947 (BX890562.2)



Basic Information


Item Value
gene id XLOC_026947
gene name BX890562.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 402626 ~ 499946 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00053219
GCGGCAGGTTTACCGAACAGCGTGTGTTGATTTTCTCCCGCGAACCGGCAGATGACGAGAGGAGAAccggagacagacagacagaaaCAGTGGCGGATGGATCTCAGGTTCTCCAGGATTGTGTCTCGGCGGGGACTCGCCGGACTGTCATCGACGGGAAGCTGGACTTTGAGGAACTGCTTTCCTTCTCTTGGTGTGGCCTGAATGAAGCCTCTGTGTGGATCTGCAGAAACTCCACAAATCACACAGGAGATTTTCACCTCTTGCCACTCACTTAGCCATCATGTGCACCGCCGCGgtctgtttatttgctgaaagaCACACCAGGAAGTGCAGCTTCAAACACGGCCTGCAGTTATAAACCTCATTCCTCTGAGCGGCCCACCTGCATGCAGACACCTGGCCCAAACACAGGGAAAATTCCAGAGCAGTGGACGCACATCCCATTTCCAGCTCTCCCAAACAAAGACTGTCTGGAGCGGCACATTTCAGAAGAGaACAGCAGGCGAGAGAGCGGGAACTGTGCTTGT

Function


GO:

id name namespace
GO:0009451 RNA modification biological_process
GO:0005737 cytoplasm cellular_component

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093924

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00053219 True 530 lncRNA 0.54 4 402626 499946

Neighbor


gene id symbol gene type direction distance location
XLOC_026946 NA coding upstream 141 398517 ~ 402485 (+)
XLOC_026944 rpl18a coding upstream 4175 391297 ~ 398451 (+)
XLOC_026945 BX890562.1 coding upstream 8724 393766 ~ 393902 (+)
XLOC_026943 tmem181 coding upstream 16458 357810 ~ 386168 (+)
XLOC_026942 tulp4a coding upstream 48702 331351 ~ 353924 (+)
XLOC_026949 AL845512.1 coding downstream 54321 554267 ~ 554384 (+)
XLOC_026950 NA coding downstream 77904 577850 ~ 587076 (+)
XLOC_026951 pthlha coding downstream 112417 612363 ~ 626550 (+)
XLOC_026952 xpot coding downstream 146208 646154 ~ 675427 (+)
XLOC_026953 CU855889.1 coding downstream 181555 681501 ~ 683465 (+)
XLOC_026937 NA non-coding upstream 155657 246350 ~ 246969 (+)
XLOC_026934 NA non-coding upstream 325955 74199 ~ 76671 (+)
XLOC_026955 NA non-coding downstream 203153 703099 ~ 720805 (+)
XLOC_026957 NA non-coding downstream 243918 743864 ~ 747292 (+)

Expression



Co-expression Network