G774681


Basic Information

Item Value
gene id G774681
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 15284319 ~ 15285918 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU882735
TCAGCGTATGATATGTCTGTgacactacagtgtgtgtgtgtggtcagcgtACGATATATCTGTGTGAcacgacagtgtgtgtgtggtcagcgtACGATATGTCTGTGTgacactacagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgtcagcgTACGATATGTCTGTGTgacactacagtgtgtgtgtgtggtcagcgtACGATATGTCTGTgacactacagtgtgtgtgtgtggtcagcgtACGATATGTCTGTGTgacactacagtgtgtgtgtgaagggatgTTCCTTCATACAGAGTGGCATAGGTCTGAACTGAAAGACACCTTTTGCACAGACGACTTGTATTCATTGGGAGAGGAAGTCTGTTAACCCTCTAAGTGTGTGGTCAGCGTACGATATGTCTGTGTgacactacagtgtgtgtgtggtcagcgtACGATGTCTGTGTgacactacagtgtgtgtgtggtcagcgtACGATATGTCTGTGTgacactacagtgtgtgtgtggtcagcgtACGATATGTCTGTGTGACACTACAGTGTGTGTGGGGTCAGCGTACGATATGTCTGTGTGACACTACAttgtgtgtgtggtcagtgtACGATATGTCTGTGTGACACTACAGTGTGTGTTGTCAGCGTATGATATGTCTGTGACACTACAGTGTGTGGTCAGCGTACGATATGTCTGTgacactacagtgtgtgtgtgtggtcagcgtACGATATATCTGTGTGAcacgacagtgtgtgtgtggtcagcgtACGATATGTCTGTGTGACActacagtgcgtgtgtgtgtggtcagcgtACGATATGTCTGTGTgacactacagtgtgtgtgtgtggtcagcgtACGATATGTCTGTGTgacactacagtgtgtgtgtgtgtgtggtcagcgtACGATATGTCTGTGTGACACTACAGTGTGTGTTGGGGCTCCAGAGGGGATTTTTCGTTTACCTTGGCATAGTGGACGATTCCAGACTCTTACTTTCATTCTGTCTCTTAGCTCGACATTCGTTTACCCACTCTTTTGAGTAGGTTATTTTTCTTCTGGTCTTTTGTCTGTGTTTTTCCTACATTTCTGTCTAGAGTTCTCTAACCATCTCTCTCACATAGAGGTTAGAACTGATGGTTCCTCCCTTTGTCAAACCGCTGCACAACAAACTAGGGCATGCATACACATGTCTTTAATGATCATTTTCTCTTTTAATCTTGTTCACTTATGTAATATAGAAATCACAATCTTGTATTTTTCCTGGAAAGCCTTTGTCCTTTCTTTTGATTTTATGTTTGTAGATACGACGACGACAAAAAGTGTACATTATTTTCTCTCACATTTGAATAAATGGTGAGGTTGTTAGCTGCGAAGAAGGAAAATTAAGTCTTGTTGCAGGTTCATGTGTATTGTGACATTAAAAAGAACTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU882735 True 1457 lncRNA 0.44 2 15284319 15285918

Neighbor

gene id symbol gene type direction distance location
LOC110531571 LOC106577852 coding downstream 2448 15270190 ~ 15281871 (-)
LOC110531572 LOC106577851 coding downstream 15597 15264166 ~ 15268722 (-)
LOC118966000 LOC106578026 coding downstream 248939 15018031 ~ 15035380 (-)
LOC110531581 LOC106578037 coding downstream 481107 14792676 ~ 14803212 (-)
LOC110531584 LOC106578021 coding downstream 591952 14687934 ~ 14692367 (-)
trnaa-ugc-30 NA coding upstream 11263 15297181 ~ 15297253 (-)
LOC110531568 LOC106577856 coding upstream 93411 15379329 ~ 15436702 (-)
rbm14b LOC106577857 coding upstream 152588 15438506 ~ 15454319 (-)
LOC110531589 ccs coding upstream 168492 15454410 ~ 15462353 (-)
LOC110531592 LOC106577860 coding upstream 267556 15553474 ~ 15569492 (-)
G774675 NA non-coding downstream 15020 15269030 ~ 15269299 (-)
G774673 NA non-coding downstream 34019 15249229 ~ 15250300 (-)
G774523 NA non-coding downstream 47850 15164072 ~ 15236469 (-)
G774641 NA non-coding downstream 53284 15159121 ~ 15231035 (-)
G774636 NA non-coding downstream 67083 15155093 ~ 15217236 (-)
G774683 NA non-coding upstream 20432 15306350 ~ 15307817 (-)
G774728 NA non-coding upstream 119584 15405502 ~ 15408709 (-)
G774767 NA non-coding upstream 221414 15507332 ~ 15507668 (-)
G774720 LOC106577859 non-coding upstream 273539 15559457 ~ 15561311 (-)
G774807 NA non-coding upstream 297095 15583013 ~ 15583220 (-)
G774562 LOC106577809 other downstream 30346 15238058 ~ 15253973 (-)
G774427 LOC106578022 other downstream 559797 14724054 ~ 14724522 (-)
LOC118966145 LOC106599223 other downstream 1030162 14249401 ~ 14254157 (-)
LOC110531538 NA other downstream 1296737 13977459 ~ 13987582 (-)
G773168 NA other downstream 1584991 13697179 ~ 13699328 (-)
G774702 LOC106577875 other upstream 66389 15352307 ~ 15361319 (-)
G774954 NA other upstream 339284 15625202 ~ 15625920 (-)
LOC110531603 groa other upstream 496439 15781909 ~ 15787666 (-)
G775139 NA other upstream 576402 15862320 ~ 15863834 (-)
G775532 NA other upstream 626918 15912836 ~ 15913294 (-)

Expression


Co-expression Network