G774016


Basic Information

Item Value
gene id G774016
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 15379350 ~ 15381388 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU881914
CCTTTTTTAAATTTATTCCAAGGTGTGTGTCTTTAACTTTGAAATGGATGGTATGGAAGCAAGCTCTTGGACTGGGTGATAGAACAGAAtaaagtgaggaggagaggaggggcatAATAGAGAAGACAGATGAGGAAAATAAAGAATTCATACACATGGGAGTTACAGATGCTGTctctgtcccaaatgacaccctcttCCCTAAGTAGTAAATGTGGTTACTTTGgatcaggtcaaaagtagtgcactacatagggaatagggtgccattttggacgaagTCTGGGGCCTAACTATGGTTCACCATATCTCTTTACCTGATGTCCTgtctcccgccctctctctctcttgcgctctgtctcgttctcgctctctctctcattctcgctctctatttaacacctctctctgtctttctctcctctcaaaATGCACAGCAAACAGACAACCGCAATACGAAGGGAGTGATGATAGagggtgacagaggagagaggtgacgTCCTGTCCTTCAAACAAAATTAGCTTTCCTGTCTGCAGGGTGACGGGTGACCAGTGGTTGACTAACTCTTATCCACAATGCATTACTCAGGTTGCTCTCTCTTGTTGGGCCtattggggggggggttcatcaGATCTACTGCATTCATTTAGGGTGTGTCCAAAATAATCCCTAAAATCACAGGCTAAATTTGATTATTGACAACTAATGTTAACATAACATTAATGGTTGACAACAGGTACTAcggtctgtctttgtctgtctgagtTGAAGGTGAGCTTGAGACTGCATGGCTTTCTTACACATAATATAACTCAACATGTATATCTTGGATAGTTGGGATTCCTACTTAATGACAACGTTATGAAAACGTTGGCACAACGTTACAAGTTTCTATGGAAAGGGAGGGGCATGTCTTCTGGGATAAGGGGTGCTATAAAGAAGTTGGGGTGTAAGGGGGGATTCAACCAATCAGATTGGACAGCATTTCCACTACAGTATAAACACAATATGCATCTGCAACAATACATAACCAACCAATCTTCTTCCACATTTTTGTAAGCCATTTTACCAAAACATATTTTAATATTCTGAGAGGAGGACAGGTGTAAATTCTTAGAAAAAACGGTGAtatctggaacctaaaagggttattcagctgtccctataggagggccctttgaagaaccctttttagttccaggtagaacccttttggaaccctttttcctaagagtgtaggGCCGGGGGCTGTGCTCCAATACTCTGCTACTGTTCAACCATTTTagtatttttctttatttctgtTCTTTCTTTGTGATCTCTCTGTCCTGCTGATCATACTAAAGGTTAGTGTGAAGCGGATTATCGTGTGACTGCAGGTGTTCTGGCTCATCAGGCACTTGGTGCAGTACAGATGACAGTATGaatgagagagggatgacagTTAAACAGTAAGATATCCAGACAGACCTAAACAGGACATGGTGAGTCTCTGAGTTTTGATTTGAGTAAAGCCTCCCACCGTCTCTTCCTCTCTGGGAAGTGTGGACAACATGGAGGAAGGTTTAAAATGAGGGAAACTTCAGATgactgagaggaggaggatagagggaggacaagtaaggggaaagaggaggagaggaggagaggagaagggagaggagggaaacaagTCGCTCTCTCCATACAGGAGAGGGGGAAGATAAAGGGAGGagaaaaggaagaggaggaggaggaggaggaggagagggggtttACAAGTCGCTCTCTCCATAGAGAGCGCTGGAGAAGGAGATGTAGTCGAGGGCTCCGGCTGGGCCGTCAGCTCCAATGTACCTGGTAAtagatatacattacattactagaGAGGTCTAATGTACCTGGTTATAGAGATACATTATATTCCTAGAGAGATCTAATGTACCTGGTCATAGAGATACATTATATTTCTAGAGGTCTAATGCACCTGGTTAAAGAGACACATTACATTACTAGAGAGGTCTAATGTACCTGGTT

Function

NR:

description
alpha-actinin-1-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU881914 True 2017 lncRNA 0.44 2 15379350 15381388

Neighbor

gene id symbol gene type direction distance location
LOC110533001 LOC106577875 coding upstream 17256 15352282 ~ 15362094 (+)
LOC118966002 NA coding upstream 30824 15342924 ~ 15348526 (+)
LOC110531573 LOC106577850 coding upstream 116707 15252465 ~ 15262643 (+)
LOC118965999 LOC106596013 coding upstream 131245 15217597 ~ 15248137 (+)
LOC118936439 LOC106596013 coding upstream 193404 15085681 ~ 15185946 (+)
LOC110531590 LOC106577858 coding downstream 89827 15471215 ~ 15505643 (+)
si:ch211-168d1.3 LOC106577859 coding downstream 142168 15523556 ~ 15561336 (+)
trnas-gcu-6 NA coding downstream 222930 15604318 ~ 15604399 (+)
nit1 nit1 coding downstream 227042 15608430 ~ 15611523 (+)
clcn3 LOC106577864 coding downstream 230187 15611575 ~ 15660094 (+)
G773997 NA non-coding upstream 64886 15313841 ~ 15314464 (+)
G773998 NA non-coding upstream 66868 15312233 ~ 15312482 (+)
G773995 NA non-coding upstream 69198 15309695 ~ 15310152 (+)
G773994 LOC106577853 non-coding upstream 70422 15307999 ~ 15308928 (+)
G773992 NA non-coding upstream 73967 15305167 ~ 15305383 (+)
G774024 NA non-coding downstream 57139 15438527 ~ 15444331 (+)
G774064 NA non-coding downstream 76903 15458291 ~ 15458506 (+)
G774069 NA non-coding downstream 88007 15469395 ~ 15469681 (+)
G774071 NA non-coding downstream 89578 15470966 ~ 15471165 (+)
G774021 NA other upstream 2162 15375224 ~ 15377188 (+)
G773983 LOC106577853 other upstream 80136 15291949 ~ 15299214 (+)
G773601 NA other upstream 995184 14382670 ~ 14384166 (+)
G773583 NA other upstream 1053517 14306630 ~ 14328474 (+)
G773562 LOC106577828 other upstream 1064100 14311468 ~ 14315250 (+)
G774065 NA other downstream 83972 15465360 ~ 15465624 (+)
G775142 NA other downstream 484701 15866089 ~ 15866708 (+)
G775306 NA other downstream 804888 16186276 ~ 16187450 (+)
LOC110532936 LOC106577844 other downstream 855986 16233342 ~ 16250864 (+)

Expression


Co-expression Network