XLOC_026950


Basic Information

Item Value
gene id XLOC_026950
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 577850 ~ 587076 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00057105
GGGAAGCTTCATGCGAAACATGTTGAGTCCTATGTTAAAGTGGGCCACACAGAGAGCGTCTGATGGCTGCGTCCCGGAGCTGAACTAAAAGCCAGCATTGTTCTGCTTTCCTCCCACGAAGATCTGGAAACATCACAGCTAATCTGAGGAGAATCAGGCCTGTGACGTCTGCAGAAAGCACACTCGTAATCTGGCAGATCACTTAAAGCTGTCTTCTGCGTTTTTACGTCTTCTCTAGATAATGTCATCTAAAAAGAGATTGGAGAACAATAAAACTAGACACTGTACAGTCAGAGTAATGTTTGACCCGGAGGTCAGTGGAGTTCCTGAGCTCTGTTTTCCACAGTAAACGGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00057105 True 354 lncRNA 0.46 3 577850 587076

Neighbor

gene id symbol gene type direction distance location
XLOC_026949 AL845512.1 coding upstream 23466 554267 ~ 554384 (+)
XLOC_026947 BX890562.2 coding upstream 77904 402626 ~ 499946 (+)
XLOC_026948 BX890562.4 coding upstream 158076 419659 ~ 419774 (+)
XLOC_026946 NA coding upstream 175365 398517 ~ 402485 (+)
XLOC_026944 rpl18a coding upstream 179399 391297 ~ 398451 (+)
XLOC_026951 pthlha coding downstream 25287 612363 ~ 626550 (+)
XLOC_026952 xpot coding downstream 59078 646154 ~ 675427 (+)
XLOC_026953 CU855889.1 coding downstream 94425 681501 ~ 683465 (+)
XLOC_026954 fbxo7 coding downstream 99081 686157 ~ 700697 (+)
XLOC_026955 NA coding downstream 116023 703099 ~ 720805 (+)
XLOC_026945 BX890562.1 non-coding upstream 183948 393766 ~ 393902 (+)
XLOC_026957 NA non-coding downstream 156788 743864 ~ 747292 (+)
XLOC_026958 NA non-coding downstream 192393 779469 ~ 800589 (+)
XLOC_026959 NA non-coding downstream 254904 841980 ~ 845249 (+)

Expression


Co-expression Network