G774069


Basic Information

Item Value
gene id G774069
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 15469395 ~ 15469681 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU881980
aaagaaaacccttgaatgagccgatgtgtccaaacttttggctggtccTGTATGTTAAAGTCATTATTTGGCAACAGTCATAACACACCTATCTGATCTAATTAAAATGAGTTTGTCAATGACACATGTTTGTTCTACAAGGTATATGCGGTGGAGATTTTTAAAAGATGATAGTTCTCTTTGAGATGCTCAGCTACAGtgaattctgaaagtattcacaccccttgaccttttccacattttgttacgttacagccttattctaatgatgatcaatggaaacagga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU881980 True 287 lncRNA 0.37 1 15469395 15469681

Neighbor

gene id symbol gene type direction distance location
LOC110533001 LOC106577875 coding upstream 107301 15352282 ~ 15362094 (+)
LOC118966002 NA coding upstream 120869 15342924 ~ 15348526 (+)
LOC110531573 LOC106577850 coding upstream 206752 15252465 ~ 15262643 (+)
LOC118965999 LOC106596013 coding upstream 221290 15217597 ~ 15248137 (+)
LOC118936439 LOC106596013 coding upstream 283449 15085681 ~ 15185946 (+)
LOC110531590 LOC106577858 coding downstream 1534 15471215 ~ 15505643 (+)
si:ch211-168d1.3 LOC106577859 coding downstream 53875 15523556 ~ 15561336 (+)
trnas-gcu-6 NA coding downstream 134637 15604318 ~ 15604399 (+)
nit1 nit1 coding downstream 138749 15608430 ~ 15611523 (+)
clcn3 LOC106577864 coding downstream 141894 15611575 ~ 15660094 (+)
G774064 NA non-coding upstream 10889 15458291 ~ 15458506 (+)
G774024 NA non-coding upstream 25064 15438527 ~ 15444331 (+)
G774016 NA non-coding upstream 88007 15379350 ~ 15381388 (+)
G773997 NA non-coding upstream 154931 15313841 ~ 15314464 (+)
G773998 NA non-coding upstream 156913 15312233 ~ 15312482 (+)
G774071 NA non-coding downstream 1285 15470966 ~ 15471165 (+)
G774088 NA non-coding downstream 50395 15520076 ~ 15520343 (+)
G774109 LOC106577860 non-coding downstream 97681 15567362 ~ 15569488 (+)
G774120 NA non-coding downstream 115086 15584767 ~ 15584978 (+)
G774065 NA other upstream 3771 15465360 ~ 15465624 (+)
G774021 NA other upstream 92207 15375224 ~ 15377188 (+)
G773983 LOC106577853 other upstream 170181 15291949 ~ 15299214 (+)
G773601 NA other upstream 1085229 14382670 ~ 14384166 (+)
G773583 NA other upstream 1143562 14306630 ~ 14328474 (+)
G775142 NA other downstream 396408 15866089 ~ 15866708 (+)
G775306 NA other downstream 716595 16186276 ~ 16187450 (+)
LOC110532936 LOC106577844 other downstream 767693 16233342 ~ 16250864 (+)
LOC110532939 NA other downstream 870013 16315734 ~ 16342810 (+)

Expression


Co-expression Network