G774088


Basic Information

Item Value
gene id G774088
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 15520076 ~ 15520343 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU882001
tatatatatatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatatatatacactgggtatgcaaaacattaacaacatgacatagactgaccaggtgaacccaggtgaaagctataattccttattgatgtcacctgttaaatccacttcaatcagtgtagatggaggggaggagacgggttaaagaaggatttatgttatggtagtaggtgccaggcgcaccggtttacgCCGCAGGATttctcacgctcaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU882001 True 268 lncRNA 0.41 1 15520076 15520343

Neighbor

gene id symbol gene type direction distance location
LOC110531590 LOC106577858 coding upstream 14433 15471215 ~ 15505643 (+)
LOC110533001 LOC106577875 coding upstream 157982 15352282 ~ 15362094 (+)
LOC118966002 NA coding upstream 171550 15342924 ~ 15348526 (+)
LOC110531573 LOC106577850 coding upstream 257433 15252465 ~ 15262643 (+)
LOC118965999 LOC106596013 coding upstream 271971 15217597 ~ 15248137 (+)
si:ch211-168d1.3 LOC106577859 coding downstream 3213 15523556 ~ 15561336 (+)
trnas-gcu-6 NA coding downstream 83975 15604318 ~ 15604399 (+)
nit1 nit1 coding downstream 88087 15608430 ~ 15611523 (+)
clcn3 LOC106577864 coding downstream 91232 15611575 ~ 15660094 (+)
ino80b znhi4 coding downstream 171742 15692085 ~ 15697823 (+)
G774071 NA non-coding upstream 48911 15470966 ~ 15471165 (+)
G774069 NA non-coding upstream 50395 15469395 ~ 15469681 (+)
G774064 NA non-coding upstream 61570 15458291 ~ 15458506 (+)
G774024 NA non-coding upstream 75745 15438527 ~ 15444331 (+)
G774109 LOC106577860 non-coding downstream 47019 15567362 ~ 15569488 (+)
G774120 NA non-coding downstream 64424 15584767 ~ 15584978 (+)
G774121 NA non-coding downstream 64832 15585175 ~ 15585374 (+)
G774840 NA non-coding downstream 104973 15625316 ~ 15625581 (+)
G774065 NA other upstream 54452 15465360 ~ 15465624 (+)
G774021 NA other upstream 142888 15375224 ~ 15377188 (+)
G773983 LOC106577853 other upstream 220862 15291949 ~ 15299214 (+)
G773601 NA other upstream 1135910 14382670 ~ 14384166 (+)
G775142 NA other downstream 345746 15866089 ~ 15866708 (+)
G775306 NA other downstream 665933 16186276 ~ 16187450 (+)
LOC110532936 LOC106577844 other downstream 717031 16233342 ~ 16250864 (+)
LOC110532939 NA other downstream 819351 16315734 ~ 16342810 (+)
G775945 NA other downstream 1162851 16683194 ~ 16683491 (+)

Expression


Co-expression Network