XLOC_026953 (CU855889.1)



Basic Information


Item Value
gene id XLOC_026953
gene name CU855889.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 681501 ~ 683465 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00053225
GTCCTCTCTTCTTGGCTTTGGAGGAGACTTTGTTTGGGTCGGCCTGCAGCATGCGTCCGTACTCCTCACAGTGCTCTTTATCCTCCGCCCAGGCGTATCCCTCCCTCAGAGACCAGTCCACACCCATCTCCAACGCCTCCTCCAGGAATGACGCCCTTGGAGCCGACTCCGACAGGGATGTGGTCGAAGAGAGACTGTGCCAGCTGCTCCTTCACCGGCTGAACGTCGCCCTCATCCAGGTTTGTGCGCAGCAGACGAACACCACAGTTAATATCGAAACCCACAccgcctgaacacacacacacacacacacacacacacacacggatatTTAATGATGAAATATCTCAGGATAACGAACAAGCACATTATTAGCACATACCTGGAGAGACGACTGCGTCCGGATTCTCCATGTCGAACGCTGCCATGTTCCCGATAGCGAATCCGTATCCTGAGTGAACGTCCGGTAAACCGATCGACCGCTGCAAAAACACTCAGAGTGAGAACTGAGCATAGGTGCATGATGAGCTGATCAGGACTGTGTGTTTAACTCACGTGCACGATTCCTGGCAGAGCGGCCACATTCCCAATCTGCTTCATCGCAGGTAAGAAACCTCCAAACCCTGTGCAAACACC

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000102104

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00053225 True 636 lncRNA 0.53 2 681501 683465

Neighbor


gene id symbol gene type direction distance location
XLOC_026952 xpot coding upstream 6074 646154 ~ 675427 (+)
XLOC_026951 pthlha coding upstream 54951 612363 ~ 626550 (+)
XLOC_026950 NA coding upstream 94425 577850 ~ 587076 (+)
XLOC_026949 AL845512.1 coding upstream 127117 554267 ~ 554384 (+)
XLOC_026947 BX890562.2 coding upstream 181555 402626 ~ 499946 (+)
XLOC_026954 fbxo7 coding downstream 2692 686157 ~ 700697 (+)
XLOC_026955 NA coding downstream 19634 703099 ~ 720805 (+)
XLOC_026956 ost4 coding downstream 52930 736395 ~ 737520 (+)
XLOC_026957 NA coding downstream 60399 743864 ~ 747292 (+)
XLOC_026958 NA coding downstream 96004 779469 ~ 800589 (+)
XLOC_026948 BX890562.4 non-coding upstream 261727 419659 ~ 419774 (+)
XLOC_026946 NA non-coding upstream 279016 398517 ~ 402485 (+)
XLOC_026959 NA non-coding downstream 158515 841980 ~ 845249 (+)
XLOC_026962 NA non-coding downstream 258181 941646 ~ 943901 (+)

Expression



Co-expression Network