G775056



Basic Information


Item Value
gene id G775056
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 15794514 ~ 15794974 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU883155
ATCAAAGGTTTGATGATGATTTGATTAGTGGAATCAGGTAAGTAATGCTAGTAGTGCTGAGATGAAGGTAGACTGTAGGTGGAGTCAGAGGGGCTTAACAGGCATGATACACTAGCACAGGATGCCGTGTGGTGAAAGACCCCTTCCCATTAATTTCAATGGAAGGAAAgcagtgagaagaggagagggcaggggacCTTTGGGTGGTGCAAAGGTGGTGTGGAAAGCAGTGAAAAATACACTTTTCCTAACTTTATGCAAATCACCAGCGGCGACGACCAATCATATTGAGTGGTTCCCATGACGAATTTGACACTATGCGACTCAAGGCTGGAGACTTTCTTcaacaaagatggctgacaaaaatactaggatggaagcaaatgtaagtgaTTATAATGTCATAACGAATCATGCAAAAAATGTACATTTgacaggaatatgttagttaatgtagagac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU883155 True 461 lncRNA 0.42 1 15794514 15794974

Neighbor


gene id symbol gene type direction distance location
LOC110531603 groa coding downstream 6848 15781909 ~ 15787666 (-)
LOC118966198 NA coding downstream 50964 15743342 ~ 15743550 (-)
intu LOC106577868 coding downstream 53661 15697822 ~ 15740853 (-)
LOC118966163 aadat coding downstream 105767 15684639 ~ 15688747 (-)
mfap3l mfa3l coding downstream 115662 15666490 ~ 15678852 (-)
LOC110531606 LOC106577834 coding upstream 7008 15801982 ~ 15804621 (-)
LOC118966175 LOC106577834 coding upstream 15177 15810151 ~ 15813197 (-)
cxcd2 cxcd2 coding upstream 25437 15820411 ~ 15823218 (-)
LOC118966003 NA coding upstream 59243 15854217 ~ 15857206 (-)
LOC110532935 LOC106577836 coding upstream 72932 15867906 ~ 15891269 (-)
G775054 NA non-coding downstream 508 15793471 ~ 15794006 (-)
G775053 NA non-coding downstream 1163 15792846 ~ 15793351 (-)
G775050 NA non-coding downstream 2775 15789611 ~ 15791739 (-)
G775042 NA non-coding downstream 18080 15776086 ~ 15776434 (-)
G775062 NA non-coding upstream 4921 15799895 ~ 15800176 (-)
G775095 cxcd2 non-coding upstream 7221 15802195 ~ 15823389 (-)
G775104 NA non-coding upstream 31616 15826590 ~ 15826845 (-)
G775105 NA non-coding upstream 33270 15828244 ~ 15828548 (-)
G775106 NA non-coding upstream 34685 15829659 ~ 15830128 (-)
G774954 NA other downstream 168594 15625202 ~ 15625920 (-)
G774702 LOC106577875 other downstream 433195 15352307 ~ 15361319 (-)
G774562 LOC106577809 other downstream 540541 15238058 ~ 15253973 (-)
G774427 LOC106578022 other downstream 1069992 14724054 ~ 14724522 (-)
G775139 NA other upstream 67346 15862320 ~ 15863834 (-)
G775532 NA other upstream 117862 15912836 ~ 15913294 (-)
LOC110531626 LOC106608856 other upstream 1032079 16827053 ~ 16828583 (-)
G776294 NA other upstream 1070493 16865467 ~ 16866034 (-)
G776340 LOC106577790 other upstream 1215038 17010012 ~ 17014685 (-)

Expression



Co-expression Network