G775085


Basic Information

Item Value
gene id G775085
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 15829705 ~ 15830128 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU883194
aaaaatcccagtaccacacggggggacctagtgaatgacctgcagagagctgggaccaaagtaacaaagcctaccatcagtaacacactacgccgccagggactcaaatcctgcagtgccagacgtgtccccatgcttaagccagtacatgtccaggcccgtctgaagtttgctagagagcatttggatgatccagaagaagattgggagaatgtcatatggtcagatgaaaccaaaatataactttttggtaaaaaactcaactcgtcgtgtttggaggacaaagaatgctgagttgcatccaaagaacaccatacctactgtgaagcatgggggtggaaacatcatgctttggggctgtttttctgcaaagggaccaggacgactgatccgtgtaaaggaaagaatgaatggggccatgtat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU883194 True 424 lncRNA 0.47 1 15829705 15830128

Neighbor

gene id symbol gene type direction distance location
ino80b znhi4 coding upstream 131882 15692085 ~ 15697823 (+)
clcn3 LOC106577864 coding upstream 169611 15611575 ~ 15660094 (+)
nit1 nit1 coding upstream 218182 15608430 ~ 15611523 (+)
trnas-gcu-6 NA coding upstream 225306 15604318 ~ 15604399 (+)
si:ch211-168d1.3 LOC106577859 coding upstream 268369 15523556 ~ 15561336 (+)
trnav-uac-14 NA coding downstream 290836 16120964 ~ 16121036 (+)
trnav-uac-15 NA coding downstream 299602 16129730 ~ 16129802 (+)
trnak-cuu-3 NA coding downstream 302676 16132804 ~ 16132876 (+)
trnan-guu-4 NA coding downstream 304169 16134297 ~ 16134370 (+)
trnan-guu-5 NA coding downstream 313372 16143500 ~ 16143573 (+)
G775081 NA non-coding upstream 1802 15827588 ~ 15827903 (+)
G775078 NA non-coding upstream 5617 15823851 ~ 15824088 (+)
G775063 NA non-coding upstream 9210 15802202 ~ 15820495 (+)
G775055 NA non-coding upstream 34601 15794893 ~ 15795104 (+)
G775038 NA non-coding upstream 36259 15792850 ~ 15793446 (+)
G775114 NA non-coding downstream 10927 15841055 ~ 15841281 (+)
G775121 NA non-coding downstream 17525 15847653 ~ 15849745 (+)
G775123 NA non-coding downstream 23136 15853264 ~ 15856162 (+)
G775128 NA non-coding downstream 29761 15859889 ~ 15860129 (+)
G775129 NA non-coding downstream 30341 15860469 ~ 15863832 (+)
LOC110531590 LOC106577858 other upstream 328629 15471215 ~ 15505643 (+)
G774065 NA other upstream 364081 15465360 ~ 15465624 (+)
G774021 NA other upstream 452517 15375224 ~ 15377188 (+)
G773983 LOC106577853 other upstream 530491 15291949 ~ 15299214 (+)
G773601 NA other upstream 1445539 14382670 ~ 14384166 (+)
G775142 NA other downstream 35961 15866089 ~ 15866708 (+)
G775306 NA other downstream 356148 16186276 ~ 16187450 (+)
LOC110532936 LOC106577844 other downstream 407246 16233342 ~ 16250864 (+)
LOC110532939 NA other downstream 509566 16315734 ~ 16342810 (+)
G775945 NA other downstream 853066 16683194 ~ 16683491 (+)

Expression


Co-expression Network