Gene
RNA
| Item | Value |
|---|---|
| gene id | G775524 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 15899025 ~ 15899479 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: retrotransposon-like protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU883728 | True | 455 | lncRNA | 0.48 | 1 | 15899025 | 15899479 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532935 | LOC106577836 | coding | downstream | 7756 | 15867906 ~ 15891269 (-) |
| LOC118966003 | NA | coding | downstream | 41819 | 15854217 ~ 15857206 (-) |
| cxcd2 | cxcd2 | coding | downstream | 75807 | 15820411 ~ 15823218 (-) |
| LOC118966175 | LOC106577834 | coding | downstream | 85828 | 15810151 ~ 15813197 (-) |
| LOC110531606 | LOC106577834 | coding | downstream | 94404 | 15801982 ~ 15804621 (-) |
| LOC110531609 | LOC106577837 | coding | upstream | 52449 | 15951928 ~ 15979801 (-) |
| LOC110531610 | LOC106577838 | coding | upstream | 92462 | 15991941 ~ 16029898 (-) |
| trnal-cag-5 | NA | coding | upstream | 114057 | 16013536 ~ 16013618 (-) |
| LOC110531611 | LOC106577839 | coding | upstream | 149265 | 16048744 ~ 16087030 (-) |
| LOC110531612 | LOC106577840 | coding | upstream | 196483 | 16095962 ~ 16117909 (-) |
| G775523 | NA | non-coding | downstream | 815 | 15897934 ~ 15898210 (-) |
| G775511 | NA | non-coding | downstream | 19487 | 15879339 ~ 15879538 (-) |
| G775120 | NA | non-coding | downstream | 54059 | 15844740 ~ 15844966 (-) |
| G775525 | NA | non-coding | upstream | 1413 | 15900892 ~ 15901203 (-) |
| G775538 | NA | non-coding | upstream | 26748 | 15926227 ~ 15926590 (-) |
| G775541 | NA | non-coding | upstream | 31146 | 15930625 ~ 15930937 (-) |
| G775516 | NA | non-coding | upstream | 51316 | 15950795 ~ 15951787 (-) |
| G775558 | NA | non-coding | upstream | 68606 | 15968085 ~ 15968752 (-) |
| G775139 | NA | other | downstream | 35191 | 15862320 ~ 15863834 (-) |
| LOC110531603 | groa | other | downstream | 111419 | 15781909 ~ 15787666 (-) |
| G774954 | NA | other | downstream | 273105 | 15625202 ~ 15625920 (-) |
| G774702 | LOC106577875 | other | downstream | 537706 | 15352307 ~ 15361319 (-) |
| G774562 | LOC106577809 | other | downstream | 645052 | 15238058 ~ 15253973 (-) |
| G775532 | NA | other | upstream | 13357 | 15912836 ~ 15913294 (-) |
| LOC110531626 | LOC106608856 | other | upstream | 927574 | 16827053 ~ 16828583 (-) |
| G776294 | NA | other | upstream | 965988 | 16865467 ~ 16866034 (-) |
| G776340 | LOC106577790 | other | upstream | 1110533 | 17010012 ~ 17014685 (-) |
| G776355 | NA | other | upstream | 1125901 | 17025380 ~ 17025813 (-) |
