G775228


Basic Information

Item Value
gene id G775228
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 16030245 ~ 16030489 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU883367
GTACTGACAAGCAGGAGCACTGATTCTGTAAAGGTTGTGACCCTCACAGCAGATCTTGGCAGGACTTAGTCTAGAGACTCACACATCTGCGTGCCCTAGTCCTGTTCCGCTGCCCCACTGCGCATACACAtcccttcacacacacatacgggcgtacacacacacaccccaacggCCCTGTGGGGTGTGTGCTGACAACactcttcttcccctcctcctcttctcaaaCTGCACCAACTGACCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU883367 True 245 lncRNA 0.55 1 16030245 16030489

Neighbor

gene id symbol gene type direction distance location
ino80b znhi4 coding upstream 332422 15692085 ~ 15697823 (+)
clcn3 LOC106577864 coding upstream 370151 15611575 ~ 15660094 (+)
nit1 nit1 coding upstream 418722 15608430 ~ 15611523 (+)
trnas-gcu-6 NA coding upstream 425846 15604318 ~ 15604399 (+)
si:ch211-168d1.3 LOC106577859 coding upstream 468909 15523556 ~ 15561336 (+)
trnav-uac-14 NA coding downstream 90475 16120964 ~ 16121036 (+)
trnav-uac-15 NA coding downstream 99241 16129730 ~ 16129802 (+)
trnak-cuu-3 NA coding downstream 102315 16132804 ~ 16132876 (+)
trnan-guu-4 NA coding downstream 103808 16134297 ~ 16134370 (+)
trnan-guu-5 NA coding downstream 113011 16143500 ~ 16143573 (+)
G775227 NA non-coding upstream 277 16029674 ~ 16029968 (+)
G775168 NA non-coding upstream 77055 15952360 ~ 15953190 (+)
G775194 NA non-coding upstream 79830 15950190 ~ 15950415 (+)
G775187 NA non-coding upstream 98341 15931651 ~ 15931904 (+)
G775186 NA non-coding upstream 99231 15930749 ~ 15931014 (+)
G775231 NA non-coding downstream 6595 16037084 ~ 16037390 (+)
G775234 NA non-coding downstream 11673 16042162 ~ 16042627 (+)
G775236 NA non-coding downstream 15117 16045606 ~ 16046182 (+)
G775290 NA non-coding downstream 101235 16131724 ~ 16132203 (+)
G775291 NA non-coding downstream 101970 16132459 ~ 16132667 (+)
G775142 NA other upstream 163537 15866089 ~ 15866708 (+)
LOC110531590 LOC106577858 other upstream 529169 15471215 ~ 15505643 (+)
G774065 NA other upstream 564621 15465360 ~ 15465624 (+)
G774021 NA other upstream 653057 15375224 ~ 15377188 (+)
G773983 LOC106577853 other upstream 731031 15291949 ~ 15299214 (+)
G775306 NA other downstream 155787 16186276 ~ 16187450 (+)
LOC110532936 LOC106577844 other downstream 206885 16233342 ~ 16250864 (+)
LOC110532939 NA other downstream 309205 16315734 ~ 16342810 (+)
G775945 NA other downstream 652705 16683194 ~ 16683491 (+)
LOC110532942 LOC106577806 other downstream 1266566 17292470 ~ 17305629 (+)

Expression


Co-expression Network