G775236


Basic Information

Item Value
gene id G775236
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 16045606 ~ 16046182 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU883377
GTCCTTTCGAGCCAGAGAGCTTGAAAACCACTTTTTCAAaccagaacacaaagaaagtcTCTTTAAATAAGTGCAATTTGTTAATGAGACAAAGAATTGTAAAGCATATATCACGTTTTTAATTTTTtctgtctttttttgttgttttttgttgttgctgtttcttgatgttgttgttttttgttgttgtaaacatCACATGGTACTGAGATGGAGATACTTGTGCTAATatccatatatttacattgtAGTTGTTCTTCACTGTGAGTAGTAGAACGGTGCCGATTAACTTGACATGGTCGAACACAACTTTTACTTAGCCTGATCACAGATCAGTTTGTACTTTTATCCAACAGCATGACAAATTATAGTTGGCTTAAGCACACACAGATTGGGAATCAGGCTTCAACTTTACTGCCAAAAGGAAACAATGTACTGAATGGCCTTATATACTGTACCCTCACATAACCTTACTGTGCATAAGAACAAAACACTGCCTCTgtactttattattattatttattttttaaataaacaaacattGCCACACAATCGCATAAAACCATCAAAGTCATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU883377 True 577 lncRNA 0.34 1 16045606 16046182

Neighbor

gene id symbol gene type direction distance location
ino80b znhi4 coding upstream 347783 15692085 ~ 15697823 (+)
clcn3 LOC106577864 coding upstream 385512 15611575 ~ 15660094 (+)
nit1 nit1 coding upstream 434083 15608430 ~ 15611523 (+)
trnas-gcu-6 NA coding upstream 441207 15604318 ~ 15604399 (+)
si:ch211-168d1.3 LOC106577859 coding upstream 484270 15523556 ~ 15561336 (+)
trnav-uac-14 NA coding downstream 74782 16120964 ~ 16121036 (+)
trnav-uac-15 NA coding downstream 83548 16129730 ~ 16129802 (+)
trnak-cuu-3 NA coding downstream 86622 16132804 ~ 16132876 (+)
trnan-guu-4 NA coding downstream 88115 16134297 ~ 16134370 (+)
trnan-guu-5 NA coding downstream 97318 16143500 ~ 16143573 (+)
G775234 NA non-coding upstream 2979 16042162 ~ 16042627 (+)
G775231 NA non-coding upstream 8216 16037084 ~ 16037390 (+)
G775228 NA non-coding upstream 15117 16030245 ~ 16030489 (+)
G775227 NA non-coding upstream 15638 16029674 ~ 16029968 (+)
G775168 NA non-coding upstream 92416 15952360 ~ 15953190 (+)
G775290 NA non-coding downstream 85542 16131724 ~ 16132203 (+)
G775291 NA non-coding downstream 86277 16132459 ~ 16132667 (+)
G775294 NA non-coding downstream 89415 16135597 ~ 16135829 (+)
G775296 NA non-coding downstream 90466 16136648 ~ 16136992 (+)
G775298 NA non-coding downstream 103943 16150125 ~ 16150593 (+)
G775142 NA other upstream 178898 15866089 ~ 15866708 (+)
LOC110531590 LOC106577858 other upstream 544530 15471215 ~ 15505643 (+)
G774065 NA other upstream 579982 15465360 ~ 15465624 (+)
G774021 NA other upstream 668418 15375224 ~ 15377188 (+)
G773983 LOC106577853 other upstream 746392 15291949 ~ 15299214 (+)
G775306 NA other downstream 140094 16186276 ~ 16187450 (+)
LOC110532936 LOC106577844 other downstream 191192 16233342 ~ 16250864 (+)
LOC110532939 NA other downstream 293512 16315734 ~ 16342810 (+)
G775945 NA other downstream 637012 16683194 ~ 16683491 (+)
LOC110532942 LOC106577806 other downstream 1250873 17292470 ~ 17305629 (+)

Expression


Co-expression Network