G775290


Basic Information

Item Value
gene id G775290
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 16131724 ~ 16132203 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU883433
gcaacagctctggtgggcattcctgcagtcagcatgccaatttagcgctcccttaaaacttgagacatctgtgacattgtgttgtgtgacaaaactgcacattttagagtgactgttttcatcagcttcttgataagccacacctgtcaggtgaaaggattatcttggcaaaggagaaatacccACTGAAAGggatgtgcacaaaatttgagagaaataagctttttgtgcatctggaacatttctgggatcttttttatttcagctcatgaaacatgggaccaacactacatgttgcgtttatatttttgttcaaagcATATTCGGTTATTTAATGTAGAATTAGGTcaaccaattatgatttttcaacgctgataccgattattggatgaccaaaaaaagcagataccgattaatcggctgatgtttatatat

Function

NR:

description
hypothetical protein EH28_06569

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU883433 True 435 lncRNA 0.38 2 16131724 16132203

Neighbor

gene id symbol gene type direction distance location
trnav-uac-15 NA coding upstream 1922 16129730 ~ 16129802 (+)
trnav-uac-14 NA coding upstream 10688 16120964 ~ 16121036 (+)
ino80b znhi4 coding upstream 433901 15692085 ~ 15697823 (+)
clcn3 LOC106577864 coding upstream 471630 15611575 ~ 15660094 (+)
nit1 nit1 coding upstream 520201 15608430 ~ 15611523 (+)
trnak-cuu-3 NA coding downstream 601 16132804 ~ 16132876 (+)
trnan-guu-4 NA coding downstream 2094 16134297 ~ 16134370 (+)
trnan-guu-5 NA coding downstream 11297 16143500 ~ 16143573 (+)
trnan-guu-6 NA coding downstream 16458 16148661 ~ 16148734 (+)
trnan-guu-7 NA coding downstream 21633 16153836 ~ 16153909 (+)
G775236 NA non-coding upstream 85542 16045606 ~ 16046182 (+)
G775234 NA non-coding upstream 89097 16042162 ~ 16042627 (+)
G775231 NA non-coding upstream 94334 16037084 ~ 16037390 (+)
G775228 NA non-coding upstream 101235 16030245 ~ 16030489 (+)
G775227 NA non-coding upstream 101756 16029674 ~ 16029968 (+)
G775291 NA non-coding downstream 256 16132459 ~ 16132667 (+)
G775294 NA non-coding downstream 3394 16135597 ~ 16135829 (+)
G775296 NA non-coding downstream 4445 16136648 ~ 16136992 (+)
G775298 NA non-coding downstream 17922 16150125 ~ 16150593 (+)
G775343 NA non-coding downstream 119697 16251900 ~ 16252241 (+)
G775142 NA other upstream 265016 15866089 ~ 15866708 (+)
LOC110531590 LOC106577858 other upstream 630648 15471215 ~ 15505643 (+)
G774065 NA other upstream 666100 15465360 ~ 15465624 (+)
G774021 NA other upstream 754536 15375224 ~ 15377188 (+)
G773983 LOC106577853 other upstream 832510 15291949 ~ 15299214 (+)
G775306 NA other downstream 54073 16186276 ~ 16187450 (+)
LOC110532936 LOC106577844 other downstream 105171 16233342 ~ 16250864 (+)
LOC110532939 NA other downstream 207491 16315734 ~ 16342810 (+)
G775945 NA other downstream 550991 16683194 ~ 16683491 (+)
LOC110532942 LOC106577806 other downstream 1164852 17292470 ~ 17305629 (+)

Expression


Co-expression Network