G775497


Basic Information

Item Value
gene id G775497
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 16525972 ~ 16527089 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU883699
TGTTCACTCACATCTGCGTGGCcgcacacgactccaacaccattatgaCGTTTGCTGACGatacgacagtggtaggcctgatcaccgatgacgatgagacagcctatagggaggagtacaacaacctctccctcaacattgGCATGGgcacctcagatcctcaaaaagttctacagaagcaccattgagagcatgttgactggctgcatcaccacttggtatggcaactgcttggcatccgaccgctaGGCACTACAGAGTACAACACtgtggccgagctccctgccatccaggacttctataccaggcggtgtgagaggaaggccctaaaaatgaaacaacaaaaaaacgtcaaaaactccagccacccaagtcctagactgttctctctgctaccgcacggcaagcggtaccggtgctACAAGTCTGGAactaacaggaccctgaacagcttctacccccaagccataagacggcTAAACAGGTAGTTTgtgtagctattggttaactatttaactatctgcattggccctttttgcactaacatttttgactcatcacatgttgctgctactgtttattatctgtcctGTTGCTAAGTCAATCTATTCCTAGTTACAtgttacatatctacctcaattactttgtacccctgcacatggactcagtcaTGGTACTCTGTCTATATAGCCAaattattgttactcattgtgtatttattattacatgttttacttttctattatgtttctattttctctctctgcattgttgggaagtgcccataagtaagcatttcacttttagtctacacttgttgtttacgaagcacgagacaaatgacatttgatttgatatctcaACAGTGGCACACTCTGCTGCCAGAACCCtatcaccccctctcctctgatCGTCCACTCAGCCGGCTGCACCTCCAAAACAACTTAAAACCCAATACAAAATGACAAAACAATCACATTTTGCTCCTGCAACCAAATTAAATCGGCTATAAAATGATGACTGCCTGACTGTGTTGGATGAGCTGGGCCTGGCTGGTTCAATATTAGCTGGCTGGTATAAAGATAGCTGGTTTAATGTACTTTGTTTCTGATGATGgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU883699 True 1118 lncRNA 0.44 1 16525972 16527089

Neighbor

gene id symbol gene type direction distance location
LOC110531620 LOC106577818 coding upstream 52572 16454905 ~ 16473400 (+)
LOC110533002 LOC106577819 coding upstream 81958 16440652 ~ 16444014 (+)
LOC110531617 NA coding upstream 146395 16366488 ~ 16379577 (+)
LOC110532939 NA coding upstream 183455 16315734 ~ 16342810 (+)
LOC118966164 NA coding upstream 216235 16308133 ~ 16309737 (+)
LOC110531621 LOC106577824 coding downstream 55320 16582409 ~ 16588385 (+)
LOC110531622 LOC106577817 coding downstream 62126 16589215 ~ 16593605 (+)
LOC110531623 LOC106577803 coding downstream 250445 16777534 ~ 16821342 (+)
LOC110531624 LOC106577801 coding downstream 301697 16828786 ~ 16839453 (+)
LOC110531630 NA coding downstream 365254 16892343 ~ 16907677 (+)
G775491 NA non-coding upstream 5478 16520107 ~ 16520494 (+)
G775490 NA non-coding upstream 5932 16519823 ~ 16520040 (+)
G775482 NA non-coding upstream 15932 16509841 ~ 16510040 (+)
G775477 NA non-coding upstream 22363 16503389 ~ 16503609 (+)
G775448 NA non-coding upstream 74346 16451095 ~ 16451626 (+)
G775498 NA non-coding downstream 387 16527476 ~ 16527706 (+)
G775504 NA non-coding downstream 8798 16535887 ~ 16536106 (+)
G775447 NA non-coding downstream 10618 16537707 ~ 16538089 (+)
G775887 NA non-coding downstream 53597 16580686 ~ 16580891 (+)
G775913 NA non-coding downstream 99306 16626395 ~ 16626659 (+)
LOC110532936 LOC106577844 other upstream 275108 16233342 ~ 16250864 (+)
G775306 NA other upstream 338522 16186276 ~ 16187450 (+)
G775142 NA other upstream 659264 15866089 ~ 15866708 (+)
LOC110531590 LOC106577858 other upstream 1024896 15471215 ~ 15505643 (+)
G775945 NA other downstream 156105 16683194 ~ 16683491 (+)
LOC110532942 LOC106577806 other downstream 769966 17292470 ~ 17305629 (+)
G776487 NA other downstream 853536 17380625 ~ 17394121 (+)
G776818 LOC106600668 other downstream 1131108 17658197 ~ 17659145 (+)
G777111 NA other downstream 1474800 18001889 ~ 18002182 (+)

Expression


Co-expression Network