XLOC_026966 (CR548631.1)


Basic Information

Item Value
gene id XLOC_026966
gene name CR548631.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 1191527 ~ 1191644 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053233
tatgctgGCAACTAGCTCCctgcagctctcacatggtcgcccactgaagctaagcagggctgcccccggtcagtacctggataggagactacatgggaaagctaggtcgctgacggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000100898

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053233 True 118 rRNA 0.58 1 1191527 1191644

Neighbor

gene id symbol gene type direction distance location
XLOC_026964 NA coding upstream 101340 1087530 ~ 1090187 (+)
XLOC_026963 rpap3 coding upstream 208285 966061 ~ 983242 (+)
XLOC_026962 NA coding upstream 247626 941646 ~ 943901 (+)
XLOC_026960 BX649468.1 coding upstream 263315 892959 ~ 928212 (+)
XLOC_026967 NA coding downstream 208668 1400312 ~ 1412133 (+)
XLOC_026968 NA coding downstream 213959 1405603 ~ 1408041 (+)
XLOC_026969 NA coding downstream 255411 1447055 ~ 1451055 (+)
XLOC_026970 trim35-14 coding downstream 269435 1461079 ~ 1466395 (+)
XLOC_026971 slc38a4 coding downstream 325072 1516716 ~ 1566572 (+)
XLOC_026959 NA non-coding upstream 346278 841980 ~ 845249 (+)
XLOC_026958 NA non-coding upstream 390938 779469 ~ 800589 (+)
XLOC_026957 NA non-coding upstream 444235 743864 ~ 747292 (+)
XLOC_026972 NA non-coding downstream 385206 1576850 ~ 1593812 (+)
XLOC_026975 NA non-coding downstream 492384 1684028 ~ 1685509 (+)
XLOC_026961 ripply2 coding upstream 276789 912563 ~ 914738 (+)

Expression


Co-expression Network