Gene
RNA
| Item | Value |
|---|---|
| gene id | G776166 |
| gene name | LOC106577817 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 16589278 ~ 16593605 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Thioredoxin |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU884475 | False | 1953 | lncRNA | 0.40 | 4 | 16589278 | 16593605 |
| TU884474 | True | 2372 | lncRNA | 0.45 | 2 | 16591028 | 16593605 |
16,585,000
16,586,000
16,587,000
16,588,000
16,589,000
16,590,000
16,591,000
16,591,000
16,592,000
16,593,000
16,594,000
16,595,000
16,596,000
16,597,000
NC_048573.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118966166 | NA | coding | downstream | 7473 | 16580259 ~ 16581805 (-) |
| LOC118966165 | NA | coding | downstream | 15386 | 16555795 ~ 16573892 (-) |
| LOC110531619 | LOC100380775 | coding | downstream | 149130 | 16427088 ~ 16440148 (-) |
| LOC110531616 | tesk1 | coding | downstream | 299410 | 16263464 ~ 16289868 (-) |
| LOC118966005 | msmp | coding | downstream | 356918 | 16230658 ~ 16232360 (-) |
| LOC110532940 | LOC106608858 | coding | upstream | 1458 | 16595063 ~ 16751294 (-) |
| LOC110531626 | LOC106608856 | coding | upstream | 233528 | 16827053 ~ 16828583 (-) |
| LOC110531628 | cideb | coding | upstream | 292923 | 16886528 ~ 16891710 (-) |
| LOC110531631 | dhrs4 | coding | upstream | 315233 | 16908838 ~ 16913948 (-) |
| LOC110531634 | LOC106577795 | coding | upstream | 360168 | 16953773 ~ 16966223 (-) |
| G775885 | NA | non-coding | downstream | 9041 | 16580020 ~ 16580237 (-) |
| G775883 | NA | non-coding | downstream | 11123 | 16577892 ~ 16578155 (-) |
| G775881 | NA | non-coding | downstream | 12652 | 16576068 ~ 16576626 (-) |
| G775864 | NA | non-coding | downstream | 34431 | 16554608 ~ 16554847 (-) |
| G775844 | NA | non-coding | downstream | 51045 | 16537971 ~ 16538233 (-) |
| G776170 | NA | non-coding | upstream | 780 | 16594385 ~ 16594585 (-) |
| G776172 | NA | non-coding | upstream | 9184 | 16602789 ~ 16603653 (-) |
| G776193 | NA | non-coding | upstream | 71771 | 16665376 ~ 16665634 (-) |
| G776195 | NA | non-coding | upstream | 74853 | 16668458 ~ 16669017 (-) |
| G776196 | NA | non-coding | upstream | 75651 | 16669256 ~ 16669664 (-) |
| G775532 | NA | other | downstream | 675984 | 15912836 ~ 15913294 (-) |
| G775139 | NA | other | downstream | 725444 | 15862320 ~ 15863834 (-) |
| LOC110531603 | groa | other | downstream | 801672 | 15781909 ~ 15787666 (-) |
| G774954 | NA | other | downstream | 963358 | 15625202 ~ 15625920 (-) |
| G774702 | LOC106577875 | other | downstream | 1227959 | 15352307 ~ 15361319 (-) |
| G776294 | NA | other | upstream | 271862 | 16865467 ~ 16866034 (-) |
| G776340 | LOC106577790 | other | upstream | 416407 | 17010012 ~ 17014685 (-) |
| G776355 | NA | other | upstream | 431775 | 17025380 ~ 17025813 (-) |
| G776461 | NA | other | upstream | 651829 | 17245434 ~ 17245797 (-) |
