G776172


Basic Information

Item Value
gene id G776172
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 16602789 ~ 16603653 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU884482
gtgtccatcaGGCATATGGATttattttatcagcatgaattagattgagcaataaaagcctcaCTTTTATTCtgtaggctgggatctgcactatgctaCTGTTGCAAGAAcgcattttcactggctgtccactggtttcagaAACAATGATTGATCGGCACCTTAAACTTCtcgaattcaaccattattgggttcaaatacacattaaAATTTGAACaaccatccacaacaaccacaatccgtaaggcgcagatagctaaatgagagagcagcagtgtgattcacatcaatgcgctatgtagatatcaataataagtgatatccgtatcgccgtagacgacaccactacTGTcttccttacctccaagcgtttattcaagttggataatctttggatgccgacagcagtcacacCATTGGAACACACATCTTGGACTGTAGCCTgtaaaagcctattcctgctcttttccctgCGATCcttcaaacacatttggtgtgtcatcatagtggtctctgacttgtggtcagattcgctcaggtggaacaaacttaaaattGCCCCTTTTTTCAATGTTGATttcaatgtcattgagaaaacagagaagtgccAAAGATGTttttgattacaatatttttgctggcaACGTAACGGATTTCAGTTACcttttttttgtaatcccttacatgtaacggattacatgtagtctgttactccccaaccctgtctgTCTTCTCCAGTGAGAGAGGTTGAGCCTGAAACCCTATTCACAAAGTAGAGAGGTTGAGCCTGAAACCCTATTCACACAGTAGAGAGAGGTTGAGCCTGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU884482 True 829 lncRNA 0.41 2 16602789 16603653
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118966166 NA coding downstream 20984 16580259 ~ 16581805 (-)
LOC118966165 NA coding downstream 28897 16555795 ~ 16573892 (-)
LOC110531619 LOC100380775 coding downstream 162641 16427088 ~ 16440148 (-)
LOC110531616 tesk1 coding downstream 312921 16263464 ~ 16289868 (-)
LOC118966005 msmp coding downstream 370429 16230658 ~ 16232360 (-)
LOC110531626 LOC106608856 coding upstream 223480 16827053 ~ 16828583 (-)
LOC110531628 cideb coding upstream 282875 16886528 ~ 16891710 (-)
LOC110531631 dhrs4 coding upstream 305185 16908838 ~ 16913948 (-)
LOC110531634 LOC106577795 coding upstream 350120 16953773 ~ 16966223 (-)
LOC110531636 LOC106577791 coding upstream 379057 16982710 ~ 17003093 (-)
G776170 NA non-coding downstream 8204 16594385 ~ 16594585 (-)
G776166 LOC106577817 non-coding downstream 9184 16589278 ~ 16593605 (-)
G775885 NA non-coding downstream 22552 16580020 ~ 16580237 (-)
G775883 NA non-coding downstream 24634 16577892 ~ 16578155 (-)
G775881 NA non-coding downstream 26163 16576068 ~ 16576626 (-)
G776193 NA non-coding upstream 61723 16665376 ~ 16665634 (-)
G776195 NA non-coding upstream 64805 16668458 ~ 16669017 (-)
G776196 NA non-coding upstream 65603 16669256 ~ 16669664 (-)
G776201 NA non-coding upstream 79695 16683348 ~ 16683806 (-)
G776202 NA non-coding upstream 80421 16684074 ~ 16684283 (-)
G775532 NA other downstream 689495 15912836 ~ 15913294 (-)
G775139 NA other downstream 738955 15862320 ~ 15863834 (-)
LOC110531603 groa other downstream 815183 15781909 ~ 15787666 (-)
G774954 NA other downstream 976869 15625202 ~ 15625920 (-)
G774702 LOC106577875 other downstream 1241470 15352307 ~ 15361319 (-)
G776294 NA other upstream 261814 16865467 ~ 16866034 (-)
G776340 LOC106577790 other upstream 406359 17010012 ~ 17014685 (-)
G776355 NA other upstream 421727 17025380 ~ 17025813 (-)
G776461 NA other upstream 641781 17245434 ~ 17245797 (-)

Expression

G776172 Expression in all Baseline Samples

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G776172 Expression in each Bioproject

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G776172 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 60.
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Co-expression Network