G775935


Basic Information

Item Value
gene id G775935
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 16662811 ~ 16663693 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU884213
acatacacagtagagtagaggtgaaccactggtctagacacagacacagtagagtagagtagaaaatactggtctagacacagacacagtagagtagaggtgaaccactggtctaacagacacagtagagtagaggtgaaccactggtctaacagacacagtagagtagaggtttaaccactggtctaacagacacagtagagtagaggtgaaccactggtctagacacagacacagtagagtagaggtgaaccactggtctagacacagacacagtagagtagagtagaacaactggtctagacacagacacagtagagtagtggagaaccactggtctagacacagacacagtagagtagagtagaaccactggtctaacagacgcagtagagtagaggagaaccaCTGTTCTAGATACaggcacagtagagtagaggagaaccaCTGTTCTAGATACaggcacagtagagtagaggagaaccaCTGTTCTAGATACaggcacagtagagtagaggagaaccaCTGTTCTAGATACaggcacagtagagtagaggagaaccactggtctagatacagacacagtacagtagaggagaaccactggtctagatacagacacagtagagtagaggagaaccactggtctagacacagacacagtagagtagaggtgaaccactggtctagacacagtagagtagagtagaaccactggtctaacagacacagtagagtagagtagaaccactggtctagacacagacacagtagagtagagtagaacgactggtctagacacagacacagtagagtagagtagaaccactggtgtagacacagacacagtagagtagagcagaaccactggtctagacacaga

Function

NR:

description
PREDICTED: trichohyalin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU884213 True 883 lncRNA 0.46 1 16662811 16663693

Neighbor

gene id symbol gene type direction distance location
LOC110531622 LOC106577817 coding upstream 69206 16589215 ~ 16593605 (+)
LOC110531621 LOC106577824 coding upstream 74426 16582409 ~ 16588385 (+)
LOC110531620 LOC106577818 coding upstream 189411 16454905 ~ 16473400 (+)
LOC110533002 LOC106577819 coding upstream 218797 16440652 ~ 16444014 (+)
LOC110531617 NA coding upstream 283234 16366488 ~ 16379577 (+)
LOC110531623 LOC106577803 coding downstream 113841 16777534 ~ 16821342 (+)
LOC110531624 LOC106577801 coding downstream 165093 16828786 ~ 16839453 (+)
LOC110531630 NA coding downstream 228650 16892343 ~ 16907677 (+)
LOC110531629 LOC106577796 coding downstream 250377 16914070 ~ 16925975 (+)
acin1b LOC106577794 coding downstream 262519 16926212 ~ 16953584 (+)
G775934 NA non-coding upstream 1401 16660587 ~ 16661410 (+)
G775932 NA non-coding upstream 5123 16657474 ~ 16657688 (+)
G775929 LOC106577822 non-coding upstream 10093 16652496 ~ 16652718 (+)
G775928 LOC106577822 non-coding upstream 10689 16651812 ~ 16652122 (+)
G775927 NA non-coding upstream 12925 16649582 ~ 16649886 (+)
G775937 NA non-coding downstream 5576 16669269 ~ 16669622 (+)
G775938 NA non-coding downstream 6910 16670603 ~ 16671026 (+)
G775942 NA non-coding downstream 16860 16680553 ~ 16681118 (+)
G775953 LOC106674859 non-coding downstream 29703 16693396 ~ 16694150 (+)
G776009 NA non-coding downstream 116017 16779710 ~ 16780105 (+)
LOC110532939 NA other upstream 320001 16315734 ~ 16342810 (+)
LOC110532936 LOC106577844 other upstream 411947 16233342 ~ 16250864 (+)
G775306 NA other upstream 475361 16186276 ~ 16187450 (+)
G775142 NA other upstream 796103 15866089 ~ 15866708 (+)
LOC110531590 LOC106577858 other upstream 1161735 15471215 ~ 15505643 (+)
G775945 NA other downstream 19501 16683194 ~ 16683491 (+)
LOC110532942 LOC106577806 other downstream 633362 17292470 ~ 17305629 (+)
G776487 NA other downstream 716932 17380625 ~ 17394121 (+)
G776818 LOC106600668 other downstream 994504 17658197 ~ 17659145 (+)
G777111 NA other downstream 1338196 18001889 ~ 18002182 (+)

Expression

G775935 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
End of interactive chart.

G775935 Expression in each Bioproject

Bar chart with 9 bars.
G775935 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 25.
End of interactive chart.

Co-expression Network