Gene
RNA
| Item | Value |
|---|---|
| gene id | G775938 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 16670603 ~ 16671026 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU884216 | True | 424 | lncRNA | 0.45 | 1 | 16670603 | 16671026 |
16,668,000
16,668,400
16,668,800
16,669,200
16,669,600
16,670,000
16,670,400
16,670,400
16,670,800
16,671,200
16,671,600
16,672,000
16,672,400
16,672,800
NC_048573.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531622 | LOC106577817 | coding | upstream | 76998 | 16589215 ~ 16593605 (+) |
| LOC110531621 | LOC106577824 | coding | upstream | 82218 | 16582409 ~ 16588385 (+) |
| LOC110531620 | LOC106577818 | coding | upstream | 197203 | 16454905 ~ 16473400 (+) |
| LOC110533002 | LOC106577819 | coding | upstream | 226589 | 16440652 ~ 16444014 (+) |
| LOC110531617 | NA | coding | upstream | 291026 | 16366488 ~ 16379577 (+) |
| LOC110531623 | LOC106577803 | coding | downstream | 106508 | 16777534 ~ 16821342 (+) |
| LOC110531624 | LOC106577801 | coding | downstream | 157760 | 16828786 ~ 16839453 (+) |
| LOC110531630 | NA | coding | downstream | 221317 | 16892343 ~ 16907677 (+) |
| LOC110531629 | LOC106577796 | coding | downstream | 243044 | 16914070 ~ 16925975 (+) |
| acin1b | LOC106577794 | coding | downstream | 255186 | 16926212 ~ 16953584 (+) |
| G775937 | NA | non-coding | upstream | 981 | 16669269 ~ 16669622 (+) |
| G775935 | NA | non-coding | upstream | 6910 | 16662811 ~ 16663693 (+) |
| G775934 | NA | non-coding | upstream | 9193 | 16660587 ~ 16661410 (+) |
| G775932 | NA | non-coding | upstream | 12915 | 16657474 ~ 16657688 (+) |
| G775929 | LOC106577822 | non-coding | upstream | 17885 | 16652496 ~ 16652718 (+) |
| G775942 | NA | non-coding | downstream | 9527 | 16680553 ~ 16681118 (+) |
| G775953 | LOC106674859 | non-coding | downstream | 22370 | 16693396 ~ 16694150 (+) |
| G776009 | NA | non-coding | downstream | 108684 | 16779710 ~ 16780105 (+) |
| G776015 | NA | non-coding | downstream | 151605 | 16822631 ~ 16822832 (+) |
| G776016 | NA | non-coding | downstream | 151839 | 16822865 ~ 16823073 (+) |
| LOC110532939 | NA | other | upstream | 327793 | 16315734 ~ 16342810 (+) |
| LOC110532936 | LOC106577844 | other | upstream | 419739 | 16233342 ~ 16250864 (+) |
| G775306 | NA | other | upstream | 483153 | 16186276 ~ 16187450 (+) |
| G775142 | NA | other | upstream | 803895 | 15866089 ~ 15866708 (+) |
| LOC110531590 | LOC106577858 | other | upstream | 1169527 | 15471215 ~ 15505643 (+) |
| G775945 | NA | other | downstream | 12168 | 16683194 ~ 16683491 (+) |
| LOC110532942 | LOC106577806 | other | downstream | 626029 | 17292470 ~ 17305629 (+) |
| G776487 | NA | other | downstream | 709599 | 17380625 ~ 17394121 (+) |
| G776818 | LOC106600668 | other | downstream | 987171 | 17658197 ~ 17659145 (+) |
| G777111 | NA | other | downstream | 1330863 | 18001889 ~ 18002182 (+) |
