G776009


Basic Information

Item Value
gene id G776009
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 16779710 ~ 16780105 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU884296
GAGATGACTCACTCACTGACAGGTTTCCATGGTAACTGAACTGACTGgatagtcccagggtcctttctGTTTAGAGACAGagttgggggtagagagagagagagagcgagagagagagagagagcgagaggtggagggggtcacAGCTAACAGAAAATGAAGCAGATATTGAAGGGAAGGCCCATGGTAGACCTCTCCTTTGAGCTCTATTGAATGAACCTGTATGAAGAGAGCCCCTATGTCCTGACTTCTGCCCCATAGACTCTCCACCATTCAAATATCATTCATTCATCTCCAACATAAATACTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU884296 True 310 lncRNA 0.47 2 16779710 16780105

Neighbor

gene id symbol gene type direction distance location
LOC110531622 LOC106577817 coding upstream 186105 16589215 ~ 16593605 (+)
LOC110531621 LOC106577824 coding upstream 191325 16582409 ~ 16588385 (+)
LOC110531620 LOC106577818 coding upstream 306310 16454905 ~ 16473400 (+)
LOC110533002 LOC106577819 coding upstream 335696 16440652 ~ 16444014 (+)
LOC110531617 NA coding upstream 400133 16366488 ~ 16379577 (+)
LOC110531624 LOC106577801 coding downstream 48681 16828786 ~ 16839453 (+)
LOC110531630 NA coding downstream 112238 16892343 ~ 16907677 (+)
LOC110531629 LOC106577796 coding downstream 133965 16914070 ~ 16925975 (+)
acin1b LOC106577794 coding downstream 146107 16926212 ~ 16953584 (+)
LOC118966195 NA coding downstream 147555 16927660 ~ 16927776 (+)
G775953 LOC106674859 non-coding upstream 85560 16693396 ~ 16694150 (+)
G775942 NA non-coding upstream 98592 16680553 ~ 16681118 (+)
G775938 NA non-coding upstream 108684 16670603 ~ 16671026 (+)
G775937 NA non-coding upstream 110088 16669269 ~ 16669622 (+)
G775935 NA non-coding upstream 116017 16662811 ~ 16663693 (+)
G776015 NA non-coding downstream 42526 16822631 ~ 16822832 (+)
G776016 NA non-coding downstream 42760 16822865 ~ 16823073 (+)
G776017 NA non-coding downstream 44033 16824138 ~ 16824345 (+)
G776020 NA non-coding downstream 63519 16843624 ~ 16843838 (+)
G776021 NA non-coding downstream 64624 16844729 ~ 16845006 (+)
G775945 NA other upstream 96219 16683194 ~ 16683491 (+)
LOC110532939 NA other upstream 436900 16315734 ~ 16342810 (+)
LOC110532936 LOC106577844 other upstream 528846 16233342 ~ 16250864 (+)
G775306 NA other upstream 592260 16186276 ~ 16187450 (+)
G775142 NA other upstream 913002 15866089 ~ 15866708 (+)
LOC110532942 LOC106577806 other downstream 516950 17292470 ~ 17305629 (+)
G776487 NA other downstream 600520 17380625 ~ 17394121 (+)
G776818 LOC106600668 other downstream 878092 17658197 ~ 17659145 (+)
G777111 NA other downstream 1221784 18001889 ~ 18002182 (+)
G777113 NA other downstream 1223162 18003267 ~ 18005668 (+)

Expression


Co-expression Network