G776020


Basic Information

Item Value
gene id G776020
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 16843624 ~ 16843838 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU884307
ggtctaggaacagtaggttaactgccttgttcaggggcagaacgacatatttctACCTTGTCAACTATGGGACTCAATCCACCAACCTttcaggttactggcccaacgctctaaacactaggctacctgccaccaaaTGTACTTCTCAGACCTGTCTGGAAATGACCCAGTTGAAAATATCTGAACAGAAACATCAGCATTTACAATCAATCAAC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU884307 True 215 lncRNA 0.44 1 16843624 16843838

Neighbor

gene id symbol gene type direction distance location
LOC110531624 LOC106577801 coding upstream 4171 16828786 ~ 16839453 (+)
LOC110531623 LOC106577803 coding upstream 22282 16777534 ~ 16821342 (+)
LOC110531622 LOC106577817 coding upstream 250019 16589215 ~ 16593605 (+)
LOC110531621 LOC106577824 coding upstream 255239 16582409 ~ 16588385 (+)
LOC110531620 LOC106577818 coding upstream 370224 16454905 ~ 16473400 (+)
LOC110531630 NA coding downstream 48505 16892343 ~ 16907677 (+)
LOC110531629 LOC106577796 coding downstream 70232 16914070 ~ 16925975 (+)
acin1b LOC106577794 coding downstream 82374 16926212 ~ 16953584 (+)
LOC118966195 NA coding downstream 83822 16927660 ~ 16927776 (+)
LOC118966194 NA coding downstream 84908 16928746 ~ 16928864 (+)
G776017 NA non-coding upstream 19279 16824138 ~ 16824345 (+)
G776016 NA non-coding upstream 20551 16822865 ~ 16823073 (+)
G776015 NA non-coding upstream 20792 16822631 ~ 16822832 (+)
G776009 NA non-coding upstream 63519 16779710 ~ 16780105 (+)
G775953 LOC106674859 non-coding upstream 149474 16693396 ~ 16694150 (+)
G776021 NA non-coding downstream 891 16844729 ~ 16845006 (+)
G776022 NA non-coding downstream 2100 16845938 ~ 16846148 (+)
G776023 NA non-coding downstream 7805 16851643 ~ 16851939 (+)
G776024 NA non-coding downstream 8161 16851999 ~ 16852218 (+)
G776032 NA non-coding downstream 21613 16865451 ~ 16865667 (+)
G775945 NA other upstream 160133 16683194 ~ 16683491 (+)
LOC110532939 NA other upstream 500814 16315734 ~ 16342810 (+)
LOC110532936 LOC106577844 other upstream 592760 16233342 ~ 16250864 (+)
G775306 NA other upstream 656174 16186276 ~ 16187450 (+)
G775142 NA other upstream 976916 15866089 ~ 15866708 (+)
LOC110532942 LOC106577806 other downstream 453217 17292470 ~ 17305629 (+)
G776487 NA other downstream 536787 17380625 ~ 17394121 (+)
G776818 LOC106600668 other downstream 814359 17658197 ~ 17659145 (+)
G777111 NA other downstream 1158051 18001889 ~ 18002182 (+)
G777113 NA other downstream 1159429 18003267 ~ 18005668 (+)

Expression


Co-expression Network