G776021


Basic Information

Item Value
gene id G776021
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 16844729 ~ 16845006 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU884308
GGAAATGGGTGCTTTCCGTGGGCGTTGTCCTTAATGTTTTCATGTTCAAAGAATCCCTCTTCCCACCCTCTTTTAATCTTGCTGACAATAAACCAACACTAATTTCAAACTCGTTGGCCACTATAATGTTTCTAATCTAAATGTTTTAACGGCCGGTCAGATTGCTTTTGTTCACTCTTGGTCTCTGGTCTGTTCTGCTTTTGAGGCTACTTCTAGTTAGACCTTGTTCACCATTTACTTTTATGGTGTTGACCTAGGGGATATAATCATTATTAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU884308 True 278 lncRNA 0.39 1 16844729 16845006

Neighbor

gene id symbol gene type direction distance location
LOC110531624 LOC106577801 coding upstream 5276 16828786 ~ 16839453 (+)
LOC110531623 LOC106577803 coding upstream 23387 16777534 ~ 16821342 (+)
LOC110531622 LOC106577817 coding upstream 251124 16589215 ~ 16593605 (+)
LOC110531621 LOC106577824 coding upstream 256344 16582409 ~ 16588385 (+)
LOC110531620 LOC106577818 coding upstream 371329 16454905 ~ 16473400 (+)
LOC110531630 NA coding downstream 47337 16892343 ~ 16907677 (+)
LOC110531629 LOC106577796 coding downstream 69064 16914070 ~ 16925975 (+)
acin1b LOC106577794 coding downstream 81206 16926212 ~ 16953584 (+)
LOC118966195 NA coding downstream 82654 16927660 ~ 16927776 (+)
LOC118966194 NA coding downstream 83740 16928746 ~ 16928864 (+)
G776020 NA non-coding upstream 891 16843624 ~ 16843838 (+)
G776017 NA non-coding upstream 20384 16824138 ~ 16824345 (+)
G776016 NA non-coding upstream 21656 16822865 ~ 16823073 (+)
G776015 NA non-coding upstream 21897 16822631 ~ 16822832 (+)
G776009 NA non-coding upstream 64624 16779710 ~ 16780105 (+)
G776022 NA non-coding downstream 932 16845938 ~ 16846148 (+)
G776023 NA non-coding downstream 6637 16851643 ~ 16851939 (+)
G776024 NA non-coding downstream 6993 16851999 ~ 16852218 (+)
G776032 NA non-coding downstream 20445 16865451 ~ 16865667 (+)
G776033 NA non-coding downstream 21406 16866412 ~ 16866810 (+)
G775945 NA other upstream 161238 16683194 ~ 16683491 (+)
LOC110532939 NA other upstream 501919 16315734 ~ 16342810 (+)
LOC110532936 LOC106577844 other upstream 593865 16233342 ~ 16250864 (+)
G775306 NA other upstream 657279 16186276 ~ 16187450 (+)
G775142 NA other upstream 978021 15866089 ~ 15866708 (+)
LOC110532942 LOC106577806 other downstream 452049 17292470 ~ 17305629 (+)
G776487 NA other downstream 535619 17380625 ~ 17394121 (+)
G776818 LOC106600668 other downstream 813191 17658197 ~ 17659145 (+)
G777111 NA other downstream 1156883 18001889 ~ 18002182 (+)
G777113 NA other downstream 1158261 18003267 ~ 18005668 (+)

Expression


Co-expression Network