Gene
RNA
| Item | Value |
|---|---|
| gene id | G776285 |
| gene name | LOC107661334 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 16848908 ~ 16849146 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: hephaestin-like protein 1, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU884607 | True | 239 | lncRNA | 0.49 | 1 | 16848908 | 16849146 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531626 | LOC106608856 | coding | downstream | 20325 | 16827053 ~ 16828583 (-) |
| LOC110532940 | LOC106608858 | coding | downstream | 97614 | 16595063 ~ 16751294 (-) |
| LOC118966166 | NA | coding | downstream | 267103 | 16580259 ~ 16581805 (-) |
| LOC118966165 | NA | coding | downstream | 275016 | 16555795 ~ 16573892 (-) |
| LOC110531619 | LOC100380775 | coding | downstream | 408760 | 16427088 ~ 16440148 (-) |
| LOC110531628 | cideb | coding | upstream | 37382 | 16886528 ~ 16891710 (-) |
| LOC110531631 | dhrs4 | coding | upstream | 59692 | 16908838 ~ 16913948 (-) |
| LOC110531634 | LOC106577795 | coding | upstream | 104627 | 16953773 ~ 16966223 (-) |
| LOC110531636 | LOC106577791 | coding | upstream | 133564 | 16982710 ~ 17003093 (-) |
| LOC110531638 | LOC106577815 | coding | upstream | 179456 | 17028602 ~ 17043723 (-) |
| G776284 | NA | non-coding | downstream | 1226 | 16847408 ~ 16847682 (-) |
| G776282 | NA | non-coding | downstream | 6403 | 16842273 ~ 16842505 (-) |
| G776278 | NA | non-coding | downstream | 26279 | 16822282 ~ 16822629 (-) |
| G776277 | NA | non-coding | downstream | 27034 | 16821515 ~ 16821874 (-) |
| G776214 | NA | non-coding | downstream | 145004 | 16703566 ~ 16703904 (-) |
| G776286 | NA | non-coding | upstream | 1156 | 16850302 ~ 16850610 (-) |
| G776246 | NA | non-coding | upstream | 3162 | 16852308 ~ 16852628 (-) |
| G776288 | NA | non-coding | upstream | 4698 | 16853844 ~ 16854064 (-) |
| G776293 | NA | non-coding | upstream | 13224 | 16862370 ~ 16862675 (-) |
| G776295 | NA | non-coding | upstream | 17278 | 16866424 ~ 16866680 (-) |
| G775532 | NA | other | downstream | 935614 | 15912836 ~ 15913294 (-) |
| G775139 | NA | other | downstream | 985074 | 15862320 ~ 15863834 (-) |
| LOC110531603 | groa | other | downstream | 1061302 | 15781909 ~ 15787666 (-) |
| G774954 | NA | other | downstream | 1222988 | 15625202 ~ 15625920 (-) |
| G776294 | NA | other | upstream | 16321 | 16865467 ~ 16866034 (-) |
| G776340 | LOC106577790 | other | upstream | 160866 | 17010012 ~ 17014685 (-) |
| G776355 | NA | other | upstream | 176234 | 17025380 ~ 17025813 (-) |
| G776461 | NA | other | upstream | 396288 | 17245434 ~ 17245797 (-) |
| G776652 | NA | other | upstream | 470469 | 17319615 ~ 17320373 (-) |
