G776003


Basic Information

Item Value
gene id G776003
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 16886570 ~ 16889477 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU884290
acatacacatatttagaagatgttatggcgggtgtagcgaaatgcttgtgttcttagctccaacagtgcagtaatatctaacaattcacaacaatagacacatctaaaagtaaaagaatggaattaggaaatatataaatattaggacgagcaatatCGGAGTGGCATTGATTAAAATACATTAGAATAGAATACATATgaaatacatatgaaatgagtaaaaatgagtaaagcagtatgtaaacattattaaagttagcagtgttccATCAtttaagtgaccagtgattccatgtctatgtatatagggcaacaGCCTCTAAGGTGGAGGGTTGAGTAACCGGCTGGTACCAGTTTAATATTTGATAATGTTGTTGGTAATGTTACTCAGTATATTCACTATCTGACCTCATACTGTGCTTATGCAGTCTGTGTCCTTGCCTTTTGGCAGATCTTGTGTGGTCATGAGTAAGAAAGTAATTAACTTATATATAGCCTAATTAAAGGTACAGCAACAAAAGGCTCATGTTAAATCGTATTGGTTCCTCAAGTGCTGGTCAGGTTTCCTCATACCCTTCTATGAATGAACAGAACTGTTTCTCCTTGTTCTGGAAGTGGGTGTCTCTGACAGTGGACTGAGTGGATGTAGCAACTGAAAGCATTCATTAAACACAAGATGAGACAGTGATTAGAAACCACAAAGAAAGTGACAAATAATGCATACTCAGTTTTTAAAAATTCATTGCTTCTATTTGTGGACTTCGTGGTACATTCTCAGAATTGTTAGAGAAAGATAAGTCCTATTTTACAACTAACCTTATAAAAAATCTAAACAACGTGTAATTATCCTCCTGTTTGATCACAACACACAACCTTGCATAACTCAATCATAAACATACACTCAAGTTAGGATTGATTTGGTCATTAGAGAGCGGTCGGTCCCAGTCCTGCCTTAGTTCCAGTACTCTGTGGCCTCCACCCTCTGAGGCTGCCAGAACTCTGCTCCCTCGATTATCCGCTTGATCAGATTGGCTGAGGTGATCAACATGTGACCTGCCatctggaggagggtGGACTTTTTTGGGCCCCAGACATTGGAAGTCAGCGCTGACGGAGTACCGGCCTGAGAAGGTGCCCTTCACATTCAGGGAGCCAAACACGTCCTTGGGGTTCTGCCGGTACAGGTCAAAGGTCACCCGGGCTATGTCTTTTCCTGTCCGCGACTGGTTAGGGTCCTGGCCTTTGGAGAGCACTGCACCCTGTGGGGTTAGAGTAAGATATGGGGCAAGG

Function

NR:

description
cell death activator CIDE-B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU884290 True 1290 lncRNA 0.41 2 16886570 16889477

Neighbor

gene id symbol gene type direction distance location
LOC110531624 LOC106577801 coding upstream 47117 16828786 ~ 16839453 (+)
LOC110531623 LOC106577803 coding upstream 65228 16777534 ~ 16821342 (+)
LOC110531622 LOC106577817 coding upstream 292965 16589215 ~ 16593605 (+)
LOC110531621 LOC106577824 coding upstream 298185 16582409 ~ 16588385 (+)
LOC110531620 LOC106577818 coding upstream 413170 16454905 ~ 16473400 (+)
LOC110531630 NA coding downstream 2866 16892343 ~ 16907677 (+)
LOC110531629 LOC106577796 coding downstream 24593 16914070 ~ 16925975 (+)
acin1b LOC106577794 coding downstream 36735 16926212 ~ 16953584 (+)
LOC118966195 NA coding downstream 38183 16927660 ~ 16927776 (+)
LOC118966194 NA coding downstream 39269 16928746 ~ 16928864 (+)
G776045 NA non-coding upstream 1770 16884539 ~ 16884800 (+)
G776044 NA non-coding upstream 4160 16882141 ~ 16882410 (+)
G776002 LOC106577800 non-coding upstream 9266 16871108 ~ 16877304 (+)
G776033 NA non-coding upstream 19760 16866412 ~ 16866810 (+)
G776032 NA non-coding upstream 20903 16865451 ~ 16865667 (+)
G776004 cideb non-coding downstream 253 16889730 ~ 16891747 (+)
G776050 NA non-coding downstream 18258 16907735 ~ 16908573 (+)
G776047 NA non-coding downstream 19363 16908840 ~ 16910749 (+)
G775945 NA other upstream 203079 16683194 ~ 16683491 (+)
LOC110532939 NA other upstream 543760 16315734 ~ 16342810 (+)
LOC110532936 LOC106577844 other upstream 635706 16233342 ~ 16250864 (+)
G775306 NA other upstream 699120 16186276 ~ 16187450 (+)
G775142 NA other upstream 1019862 15866089 ~ 15866708 (+)
LOC110532942 LOC106577806 other downstream 407578 17292470 ~ 17305629 (+)
G776487 NA other downstream 491148 17380625 ~ 17394121 (+)
G776818 LOC106600668 other downstream 768720 17658197 ~ 17659145 (+)
G777111 NA other downstream 1112412 18001889 ~ 18002182 (+)
G777113 NA other downstream 1113790 18003267 ~ 18005668 (+)

Expression


Co-expression Network