G776050


Basic Information

Item Value
gene id G776050
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 16907735 ~ 16908573 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU884343
ATTAGCAGAAGTGTAGGACTTTTACTCCACTGTTTACACCTCCAGGAACTGTGCATTGATTTCTGCATGTACTCTCAATTCTATGGTTAAGTGAGTACGTTATTTCAGTGCAGTTATCGTTGCCTAGCCATTACAGTGTTATTCCAAGCCTTACGTTTCTCCCATCTCGTTTCCATCTAATGGAATGTTAACTTCTCCAGTAACCGGTGACACAGGATGTCATTGGATATTCAGAGGATGAAGCGACAAAGAGTTTCAAAGGCAGTGTAAGTAGAGCCTTGGGAAGCAACTTTTATTATTAACCTTGCTTGCCCTCGTGCGTCTATGGTTCCTGAAACCACTGCAGTCTAAtgtgctctctgtctcccccagtTGTTACTACAGGTCTAAGCACGACACAAGTGCCCAACCCTCAGGGAGTTCTTTAAGCCCGGCATGACCCGACACCACCTGCTGTCTCACGGCAACGGACACAGATGACACTCAATAATTCACAGGTCTACGGCAAAATCATTtctcctggtcccagatctgtttgtgctgttatGCCAAATTATATGGTTTGTttattagacatggcaaaatcaTTTCACCATCCACTGTAAGAAAATATTTAATAGTGACTGACTAGCAGAGTTTTACGATTCTTTGTATCTGAATCACTTTGGAATAAGCATTTTAAAAAACCTGGGTGACTTTTATTGTGAAGTCAAAAGGATTGACCTGTCACCAAAACTGCACTACCTGTGTGCTGTAATACTTGTCAGTTCAATTGGCCAACACATTTTCTTTTAGGGGTAATAGGAATATCTTGACATATTGATAACTGAGGAAAAAAC

Function

NR:

description
uncharacterized protein LOC110500487 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU884343 True 839 lncRNA 0.41 1 16907735 16908573

Neighbor

gene id symbol gene type direction distance location
LOC110531630 NA coding upstream 58 16892343 ~ 16907677 (+)
LOC110531624 LOC106577801 coding upstream 68282 16828786 ~ 16839453 (+)
LOC110531623 LOC106577803 coding upstream 86393 16777534 ~ 16821342 (+)
LOC110531622 LOC106577817 coding upstream 314130 16589215 ~ 16593605 (+)
LOC110531621 LOC106577824 coding upstream 319350 16582409 ~ 16588385 (+)
LOC110531629 LOC106577796 coding downstream 5497 16914070 ~ 16925975 (+)
acin1b LOC106577794 coding downstream 17639 16926212 ~ 16953584 (+)
LOC118966195 NA coding downstream 19087 16927660 ~ 16927776 (+)
LOC118966194 NA coding downstream 20173 16928746 ~ 16928864 (+)
LOC118966193 NA coding downstream 23815 16932388 ~ 16932504 (+)
G776004 cideb non-coding upstream 15988 16889730 ~ 16891747 (+)
G776003 NA non-coding upstream 18258 16886570 ~ 16889477 (+)
G776045 NA non-coding upstream 22935 16884539 ~ 16884800 (+)
G776044 NA non-coding upstream 25325 16882141 ~ 16882410 (+)
G776047 NA non-coding downstream 267 16908840 ~ 16910749 (+)
G776079 NA non-coding downstream 82321 16990894 ~ 16991267 (+)
G776092 NA non-coding downstream 112205 17020778 ~ 17021115 (+)
G776094 NA non-coding downstream 115168 17023741 ~ 17023965 (+)
G775945 NA other upstream 224244 16683194 ~ 16683491 (+)
LOC110532939 NA other upstream 564925 16315734 ~ 16342810 (+)
LOC110532936 LOC106577844 other upstream 656871 16233342 ~ 16250864 (+)
G775306 NA other upstream 720285 16186276 ~ 16187450 (+)
G775142 NA other upstream 1041027 15866089 ~ 15866708 (+)
LOC110532942 LOC106577806 other downstream 388482 17292470 ~ 17305629 (+)
G776487 NA other downstream 472052 17380625 ~ 17394121 (+)
G776818 LOC106600668 other downstream 749624 17658197 ~ 17659145 (+)
G777111 NA other downstream 1093316 18001889 ~ 18002182 (+)
G777113 NA other downstream 1094694 18003267 ~ 18005668 (+)

Expression


Co-expression Network