G776310


Basic Information

Item Value
gene id G776310
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 16923551 ~ 16925938 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU884632
AACAGAGTCAAATGACTTATTGTAGTGTTCAACTTACATGAACTGTAGACTGGATAGATCCATATGCCTTATATAGCCATTGAGTCAATCCCAACAAATTCACtttagtgtaaaaaaaaaaaaacaacatgaaaAGCTTTCAAAAATACATTCTGGTACAAAAAAGGGAAAAATCAAATGTAGCTTAATCAAACTAACTGCTCTTCTCCATTTGTTCTGTTCAAACATTGTAGTAAAATTGAAATCACGGTGTGAAGTGAAAACATCCCTGGTTAAATGTGCATATATAACAAATATAGCAACTTAAAGCCATGCAGATCACAAAGCCACTAGGAAaaatgataaatacaattgttatTAATTATGATGACGCCTTTCTATTATTAGGCCCTCCGGCTATGGATGTGACTTTACTGTGCAGGCAGGCATTCTGTAGAAACCCTGCTACTTTCCACTAGGGGGAGCACAAAGGCAAAACACTAGTGTTTGACAAAGCTACTTCCTACTTTTTTTGGCACAGACGCATATTTGTTCATTTCACCCTCCTATCACTGCTGCAGAGTCAGACAGCAATACTAGGGAGGGTGGCAGCATTGACTTTGCAGGGTGCGATTAGTCTTTCAACAATAGGAAAGCCTAGAAGCCTGCGCCCCAATCATACCTTAGCCCCCTATGCACTTCTTATTAGGATCTGAGAGGATTGGGTAAGAGTAGCCCATGAAGCAATATGGCGATACTTCcacctagcctatcagaggctACAGGGAACTAGATAGGTAGGAGCAATGCTTGGGCACAGAAGATTAGTTTAAGCATTGACTTAAGGAGGGCGATGGTGACAAAGATTAACTTCATGGAGATACACACGCACTACAGAAATACCCCATTTGGCAAGTCTGCAACCCACCTGTCTGCTATGGATGCCTCACTGACAATAGAGTTGAATAGAAAACAGACAGGCAACAGTACACCAGCATGTCTGTCTGGGAGCTACCCGCATAGACAAAAGACAACCCTTTCTTTCTCGTCCTTTGGACAACATGTCGGGGACTGTGTAGGAAAGTGAGGGTGTGTGACGGAAGGTGTAATATGTGTGAGAAAGCgagaggaaagggagaaatgAAAAGCGAGACAGGTGTAGACAGGTAAAAGTTGGAATACAGGTTCTTCCCTCTCGATGGCCCAACCGTGGGAAAGGGCATGCCTGACTGAGCCCGCTCTTGCACCACTCCAACAACAGGTTACTTGAAACCAATCTCAGTCCCACATAGAATTCTTAATCTTCTTTCCAATCCCCCTCTTCCAGACTACAAGCTGGGAAACTGAAGGGGTAAAAGAGTAGCCATCTTGTCATCTTGCAAGCTCCTATGGTCAACGTCCTCTGGATAATACAAGTTTTACACAATCTGCAATGCAACACCAGGCAGAAACACACAGTAATGCTGCCACAGCATTTATATACAGACCCACCACCTGCACCTTCATCCAGCTCTCCCTGTTCTCCTCCATCGCAACAAACAGGATGTGGGCACACTTGCTATttttgagagagggggggggggtggagagttACTTCAAATAAATAAGGATGCAAAGATAAGAAAACAAATGTCAAAGGAAGAGGAACGTATGGCAACCAACCAGAACTAGGCTGTCTCCCATAATACGGTGGCCCAAAAGGGACACTCAATAATGTCACAAACCTGGTTCAAACATGAGCAAAACCAAACATCCATCAATCAAATAAGTTAGACACACAACGAGACAACTGTGCTTGGCAGTTGGCACTAAGAGCACAGAAGTCAATAAGTATAAAAACAAAGCCCAACCAACACACACAAAATCTAACTCAATGACAAATTTGAGGCACAGATCTCAGTTCTTCTTCAGCACTGATAATCAATGATTCCAAGTCACTTACTTCCAACGTCAAACCATTCAATTAAAAAGACCACACATTGAAACAACTATTAAggcagcatttcccaaactcggtcctcgactAAGGCATTTCAAGAAGAGAAGTTGAAGAAATATTGTCAAGATATCTCTGCGAGGCGCTTTAGCAGGCTGGAGAATCCTGCGGCATGCTGGGACAGCTCTGCCACGCGGTCCACCATTTCCTGGGTGGCAGAGACCGATGGATAGTTTTGTGCTGCCCCCTTTGTAGCCACGACGACAGCCTTCAGGGCCTGACACAGACGCCCCCCTGAGGTTGTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU884632 True 2220 lncRNA 0.44 2 16923551 16925938

Neighbor

gene id symbol gene type direction distance location
LOC110531631 dhrs4 coding downstream 9603 16908838 ~ 16913948 (-)
LOC110531628 cideb coding downstream 31841 16886528 ~ 16891710 (-)
LOC110531626 LOC106608856 coding downstream 94968 16827053 ~ 16828583 (-)
LOC110532940 LOC106608858 coding downstream 172257 16595063 ~ 16751294 (-)
LOC118966166 NA coding downstream 341746 16580259 ~ 16581805 (-)
LOC110531634 LOC106577795 coding upstream 27835 16953773 ~ 16966223 (-)
LOC110531636 LOC106577791 coding upstream 56772 16982710 ~ 17003093 (-)
LOC110531638 LOC106577815 coding upstream 102664 17028602 ~ 17043723 (-)
LOC110532941 LOC106577784 coding upstream 124811 17050749 ~ 17064251 (-)
LOC110531640 LOC106577784 coding upstream 150992 17076930 ~ 17080885 (-)
G776307 NA non-coding downstream 18863 16904421 ~ 16904688 (-)
G776295 NA non-coding downstream 56871 16866424 ~ 16866680 (-)
G776293 NA non-coding downstream 60876 16862370 ~ 16862675 (-)
G776288 NA non-coding downstream 69487 16853844 ~ 16854064 (-)
G776246 NA non-coding downstream 70923 16852308 ~ 16852628 (-)
G776247 NA non-coding upstream 26468 16952406 ~ 16953579 (-)
G776329 NA non-coding upstream 45096 16971034 ~ 16971531 (-)
G776346 NA non-coding upstream 77858 17003796 ~ 17004079 (-)
G776347 NA non-coding upstream 78404 17004342 ~ 17004571 (-)
G776350 NA non-coding upstream 90012 17015950 ~ 17016162 (-)
G776294 NA other downstream 57517 16865467 ~ 16866034 (-)
G775532 NA other downstream 1010257 15912836 ~ 15913294 (-)
G775139 NA other downstream 1059717 15862320 ~ 15863834 (-)
LOC110531603 groa other downstream 1135945 15781909 ~ 15787666 (-)
G776340 LOC106577790 other upstream 84074 17010012 ~ 17014685 (-)
G776355 NA other upstream 99442 17025380 ~ 17025813 (-)
G776461 NA other upstream 319496 17245434 ~ 17245797 (-)
G776652 NA other upstream 393677 17319615 ~ 17320373 (-)
G776642 NA other upstream 419540 17345478 ~ 17354347 (-)

Expression


Co-expression Network