Item | Value |
---|---|
gene id | XLOC_026972 |
gene name | NA |
gene type | non-coding |
species | zebrafish (Danio rerio) |
category of species | model fish |
Item | Value |
---|---|
chromosome id | NC_007115.7 |
NCBI id | CM002888.2 |
chromosome length | 78093715 |
location | 1576850 ~ 1593812 (+) |
genome version | GRCz11_2017_zebrafish_Genome |
id | name | namespace |
---|---|---|
GO:0019219 | regulation of nucleobase-containing compound metabolic process | biological_process |
GO:0080090 | regulation of primary metabolic process | biological_process |
GO:0006351 | transcription, DNA-templated | biological_process |
GO:0051171 | regulation of nitrogen compound metabolic process | biological_process |
GO:0043632 | modification-dependent macromolecule catabolic process | biological_process |
GO:0097659 | nucleic acid-templated transcription | biological_process |
GO:0031323 | regulation of cellular metabolic process | biological_process |
GO:0044260 | cellular macromolecule metabolic process | biological_process |
GO:0019941 | modification-dependent protein catabolic process | biological_process |
GO:0006511 | ubiquitin-dependent protein catabolic process | biological_process |
GO:0060255 | regulation of macromolecule metabolic process | biological_process |
GO:0032774 | RNA biosynthetic process | biological_process |
GO:0044451 | obsolete nucleoplasm part | cellular_component |
GO:0017119 | Golgi transport complex | cellular_component |
GO:0005634 | nucleus | cellular_component |
GO:0043226 | organelle | cellular_component |
GO:0043227 | membrane-bounded organelle | cellular_component |
GO:0043229 | intracellular organelle | cellular_component |
GO:0043231 | intracellular membrane-bounded organelle | cellular_component |
GO:0019899 | enzyme binding | molecular_function |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TCONS_00057503 | False | 16963 | lncRNA | 0.34 | 1 | 1576850 | 1593812 |
TCONS_00053239 | True | 1305 | lncRNA | 0.37 | 3 | 1576889 | 1593812 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
XLOC_026971 | slc38a4 | coding | upstream | 10278 | 1516716 ~ 1566572 (+) |
XLOC_026970 | trim35-14 | coding | upstream | 110455 | 1461079 ~ 1466395 (+) |
XLOC_026969 | NA | coding | upstream | 125795 | 1447055 ~ 1451055 (+) |
XLOC_026967 | NA | coding | upstream | 164717 | 1400312 ~ 1412133 (+) |
XLOC_026968 | NA | coding | upstream | 168809 | 1405603 ~ 1408041 (+) |
XLOC_026973 | slc38a2 | coding | downstream | 6222 | 1600034 ~ 1617897 (+) |
XLOC_026974 | scaf11 | coding | downstream | 25772 | 1619584 ~ 1643101 (+) |
XLOC_026975 | NA | coding | downstream | 90216 | 1684028 ~ 1685509 (+) |
XLOC_026976 | NA | coding | downstream | 92674 | 1686486 ~ 1689357 (+) |
XLOC_026977 | fgfr1op2 | coding | downstream | 129087 | 1722899 ~ 1730920 (+) |
XLOC_026966 | CR548631.1 | non-coding | upstream | 385206 | 1191527 ~ 1191644 (+) |
XLOC_026964 | NA | non-coding | upstream | 486663 | 1087530 ~ 1090187 (+) |
XLOC_026978 | NA | non-coding | downstream | 139015 | 1732827 ~ 1735224 (+) |
XLOC_026981 | NA | non-coding | downstream | 231791 | 1825603 ~ 1827105 (+) |
XLOC_026982 | NA | non-coding | downstream | 249157 | 1842969 ~ 1845156 (+) |