Gene
RNA
| Item | Value |
|---|---|
| gene id | G776370 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 17041080 ~ 17041359 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU884701 | True | 280 | lncRNA | 0.45 | 1 | 17041080 | 17041359 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531636 | LOC106577791 | coding | downstream | 37987 | 16982710 ~ 17003093 (-) |
| LOC110531634 | LOC106577795 | coding | downstream | 74857 | 16953773 ~ 16966223 (-) |
| LOC110531631 | dhrs4 | coding | downstream | 127132 | 16908838 ~ 16913948 (-) |
| LOC110531628 | cideb | coding | downstream | 149370 | 16886528 ~ 16891710 (-) |
| LOC110531626 | LOC106608856 | coding | downstream | 212497 | 16827053 ~ 16828583 (-) |
| LOC110532941 | LOC106577784 | coding | upstream | 9390 | 17050749 ~ 17064251 (-) |
| LOC110531640 | LOC106577784 | coding | upstream | 35571 | 17076930 ~ 17080885 (-) |
| LOC110531642 | ylat1 | coding | upstream | 264931 | 17306290 ~ 17317711 (-) |
| LOC110531643 | LOC106577781 | coding | upstream | 280072 | 17321431 ~ 17327614 (-) |
| LOC110531645 | LOC106577780 | coding | upstream | 288975 | 17330334 ~ 17339133 (-) |
| G776353 | NA | non-coding | downstream | 18098 | 17022644 ~ 17022982 (-) |
| G776352 | NA | non-coding | downstream | 22844 | 17018009 ~ 17018236 (-) |
| G776350 | NA | non-coding | downstream | 24918 | 17015950 ~ 17016162 (-) |
| G776347 | NA | non-coding | downstream | 36509 | 17004342 ~ 17004571 (-) |
| G776346 | NA | non-coding | downstream | 37001 | 17003796 ~ 17004079 (-) |
| G776371 | NA | non-coding | upstream | 618 | 17041977 ~ 17043070 (-) |
| G776372 | NA | non-coding | upstream | 3905 | 17045264 ~ 17045470 (-) |
| G776377 | NA | non-coding | upstream | 8428 | 17049787 ~ 17050055 (-) |
| G776393 | NA | non-coding | upstream | 74226 | 17115585 ~ 17115820 (-) |
| G776355 | NA | other | downstream | 15267 | 17025380 ~ 17025813 (-) |
| G776340 | LOC106577790 | other | downstream | 26395 | 17010012 ~ 17014685 (-) |
| G776294 | NA | other | downstream | 175046 | 16865467 ~ 16866034 (-) |
| G775532 | NA | other | downstream | 1127786 | 15912836 ~ 15913294 (-) |
| G776461 | NA | other | upstream | 204075 | 17245434 ~ 17245797 (-) |
| G776652 | NA | other | upstream | 278256 | 17319615 ~ 17320373 (-) |
| G776642 | NA | other | upstream | 304119 | 17345478 ~ 17354347 (-) |
| LOC110532943 | LOC106577805 | other | upstream | 376288 | 17402378 ~ 17547902 (-) |
| G776714 | NA | other | upstream | 417318 | 17458677 ~ 17463822 (-) |
