G776112


Basic Information

Item Value
gene id G776112
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 17056594 ~ 17059241 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU884416
ACATAAAGGTGATAAACTAATATCTCTACTTAGGACTCTATTCAGTCTGTATTGATGAAGGGTTACAGATTGACTGacagaaatgtaaaggtaatttctgattgagTCTAAATATACAGTGTTTATCTTGAATGTAGTCTCCACTAACGTGGgtacattgcctttaaatttaaatCACACTGTAACGCTGAATTTCCACGATACGAACTGAATACAGCCCTTAGTCTTAGTGTGTTAGTCATATTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATATTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATATTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATATTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATATTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATATTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATATTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATATTAAACACATGAAGAACAGCAgcagtaatatactgtattaatacTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATACTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATATTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATATTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATATTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATATTAAACACATGAAGAACAGCAGCACTAACTCTATACTGTATTCATATTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATATTAAACACATGAAGAACAGCAGCAGTAATATACTGTATTCATACTAAACACATGAAGAACAGCAGCAGTAActctatactgtagtcatattAAACACATGAAGAACAGCAGTAACTCTATACTGTATTCATACTAAACACATGAAGAACAGCAGCAGTAActctatactgtagtcatattAAACACATGAAGAACAGCAGCAGTAATATACTGTATTCATATTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATATTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATATTAAACACATGAAGAACAGCATCAGTAACTCTATACTGTATTCATATTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATACTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATATTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATATTAAACACATGAAGAACAGCAGCACTAACTCTATACTGTATTCATACTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATACTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATATTAAACACATGAAGAACAGCAGCAGTAActctatactgtagtcatattAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATACTAAACACATGAAGAACAGCAGCAGTAATATACTGTATTCATATTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATACTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATATTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATATTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATACTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATACTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATATTAAACACATGAAGAACAGCAGCAGTAACTCTATACTGTATTCATATTAAACACATGAAGAACAGCAGCAGTAATATACTGTATTCATATTAAACACATGAAGAACAGCAGCAGTAATATACTGTATTCATACTAAACACATGAAGAACAGCAGCACTAACTCTATCCTGTATTCATACTAAACAtaacacagtatacagtaccatTATTATAGTTGTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU884416 True 2197 lncRNA 0.33 4 17056594 17059241

Neighbor

gene id symbol gene type direction distance location
LOC110531637 LOC106577790 coding upstream 41909 17006102 ~ 17014685 (+)
LOC110531635 LOC106577792 coding upstream 79297 16966706 ~ 16977297 (+)
LOC118966193 NA coding upstream 124090 16932388 ~ 16932504 (+)
LOC118966194 NA coding upstream 127730 16928746 ~ 16928864 (+)
LOC118966195 NA coding upstream 128818 16927660 ~ 16927776 (+)
LOC110531641 NA coding downstream 46371 17105612 ~ 17123052 (+)
LOC118966007 NA coding downstream 84772 17144013 ~ 17185719 (+)
LOC118966008 NA coding downstream 143376 17202617 ~ 17222400 (+)
LOC118966176 NA coding downstream 181629 17240870 ~ 17242550 (+)
LOC118966167 NA coding downstream 195025 17254266 ~ 17265417 (+)
G776102 NA non-coding upstream 17946 17038395 ~ 17038648 (+)
G776094 NA non-coding upstream 32629 17023741 ~ 17023965 (+)
G776092 NA non-coding upstream 35479 17020778 ~ 17021115 (+)
G776079 NA non-coding upstream 65327 16990894 ~ 16991267 (+)
acin1b LOC106577794 non-coding upstream 103010 16926212 ~ 16953584 (+)
G776130 NA non-coding downstream 20552 17079793 ~ 17080251 (+)
G776131 NA non-coding downstream 31068 17090309 ~ 17090588 (+)
G776133 NA non-coding downstream 33812 17093053 ~ 17093255 (+)
G776135 NA non-coding downstream 36377 17095618 ~ 17095855 (+)
G776136 NA non-coding downstream 38675 17097916 ~ 17098170 (+)
G775945 NA other upstream 373103 16683194 ~ 16683491 (+)
LOC110532939 NA other upstream 713784 16315734 ~ 16342810 (+)
LOC110532936 LOC106577844 other upstream 805730 16233342 ~ 16250864 (+)
G775306 NA other upstream 869144 16186276 ~ 16187450 (+)
G775142 NA other upstream 1189886 15866089 ~ 15866708 (+)
LOC110532942 LOC106577806 other downstream 237814 17292470 ~ 17305629 (+)
G776487 NA other downstream 321384 17380625 ~ 17394121 (+)
G776818 LOC106600668 other downstream 598956 17658197 ~ 17659145 (+)
G777111 NA other downstream 942648 18001889 ~ 18002182 (+)
G777113 NA other downstream 944026 18003267 ~ 18005668 (+)

Expression


Co-expression Network